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Molecular Oncology, Markers, Clinical Correlates |
1 Department of Internal Medicine, Division of Oncology, 2 Clinical Institute for Medical and Chemical Laboratory Diagnostics, and Departments of 3 Internal Medicine and 4 Orthopedic Surgery, Medical University Graz, Graz, Austria, and 5 Department of Internal Medicine, Landeskrankenanstalten Salzburg, Salzburg, Austria
| ABSTRACT |
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Experimental Design: A casecontrol study was performed including 500 patients with histologically confirmed breast cancer and 500 female, age-matched, healthy control subjects from population-based screening studies. The MMP3 5A/6A polymorphism was determined by a 5'-nuclease (TaqMan) assay.
Results: Prevalences of 5A/5A, 5A/6A, and 6A/6A genotypes were similar among patients (20.6, 51.8, and 27.6%, respectively) and controls (23.3, 47.3, and 29.4%, P = 0.34). The odds ratio of carriers of a MMP3 5A allele for breast cancer was 1.09 (95% confidence interval, 0.831.44). Patients with the 5A/5A genotype had a higher proportion of lymph-node metastases than those with a 5A/6A or 6A/6A genotype (P = 0.010).
Conclusions: The MMP3 5A/6A promoter polymorphism does not appear to influence breast cancer susceptibility but may be linked to a higher risk for metastasizing among breast cancer patients.
| INTRODUCTION |
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A common adenine insertion/deletion polymorphism (5A/6A) at position 1171 of the MMP3 gene promoter (National Center for Biotechnology Information SNP identification no. rs3025039) influences transcription factor binding and MMP3 promoter activity. In vitro promoter activity as well as in vivo gene expression of the 5A variant is about 24-fold higher than that of the 6A allele (3 , 4) . An increased risk for breast cancer in carriers of a 5A allele has been reported (5 , 6) , but was not confirmed by a subsequent study (7) .
Here we present data on the role of MMP3 5A/6A for breast cancer from a large Austrian casecontrol study.
| MATERIALS AND METHODS |
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The study was performed according to the Austrian Gene Technology Act and the guidelines of the Ethical Committee of the Universitätsklinik Graz. Written informed consent was obtained from all of the participating subjects.
Genotyping was done by a 5'-nuclease assay (TaqMan). Primer and probe sets were designed and manufactured using Applied Biosystems "Assay-by-Design" custom service (Applera, Austria). The PCR reaction was performed in a Primus 96 plus thermal cycler (MWG Biotech AG, Ebersberg, Germany) using a total volume of 5 µl containing 2.5 µl of SuperHot-Master-Mix (Bioron GmbH, Ludwigshafen, Germany), 0.125 µl of Assay-by-design Mix (Applied Biosystems, Austria), 0.375 µl of H2O, and 2 µl of DNA. Reactions were overlaid with 15 µl of mineral oil. Cycling parameters were: 1 min at 94° for primary denaturation, followed by 45 cycles of 15 s at 92° and 1 min at 60°. Fluorescence was measured in a Lambda Fluoro 320 Plus plate reader (MWG Biotech AG) using excitation/emission filters of 485 nm/530 nm for FAM-labeled probes (5A-allele) and 530 nm/572 nm for VIC-labeled probes (6A-allele). The data were exported into Excel format and analyzed as scatter plot. As a quality control, 95 samples were reanalyzed, and results were identical for all samples.
Statistical analysis was performed using SPSS 11.0 for Windows. Numeric values (e.g., age at diagnosis) were analyzed by ANOVA, proportions (e.g., genotype frequencies) of groups were compared by a
2 test. Odds ratio (OR) and 95% confidence interval (95% CI) was calculated to estimate the risk of the MMP3 genotype for breast cancer. OR of the MMP3 genotype for lymph node positivity was calculated including tumor size, tumor grade, and hormone receptor positivity as potential confounders. Threshold for significance was P < 0.05.
| RESULTS |
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The MMP3 genotype was successfully determined in all of the patients and 493 (98.6%) of the controls. Genotype distribution did not deviate from the Hardy Weinberg equilibrium in patients or controls. MMP3 genotype and allele frequencies were not significantly different between patients and controls (Table 1)
. The OR for breast cancer was 1.09 (95% CI, 0.831.44) for carriers of the high-activity MMP3 5A variant. This OR overlapped with previously reported ORs for this allele (Fig. 1)
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| DISCUSSION |
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This result seems to be contrary to the observation that MMP3 activity plays a pivotal role for tumor growth and development (2) . Although the MMP3 promoter polymorphism has been shown to be functional, its effect on breast cancer risk may be too subtle to be detected in common casecontrol studies. It is furthermore possible that regulatory effects other than the 5A/6A promoter polymorphism may be more relevant during tumor growth. Although our data suggest that this polymorphism is not a major risk factor for breast cancer, our results do not question the role of MMP3 activity itself for carcinogenesis.
In a casecontrol study from Poland, the MMP3 5A/6A polymorphism was not associated with the presence or histological stage of ovarian cancer (12) . Interestingly, in a study by Hinoda et al. (13) , the low-activity MMP3 6A/6A genotype was found more frequently in patients with colorectal cancer than in controls. This unexpected result may have been due to an observed linkage disequilibrium between MMP3 and the adjacent MMP1 locus. Haplotype analysis of the MMP gene cluster on chromosome 11q22, which includes the MMP10, MMP1, MMP3, and MMP13 genes, will probably bring more insight into the complex relation between the MMP3 polymorphism and cancer risk (13 , 14) .
In the present study, homozygotes for the high-activity MMP3 5A/5A genotype had a significantly higher proportion of lymph node metastases than carriers of other genotypes. This is in line with results of Ghilardi et al. (6) , who reported an overrepresentation of the 5A/5A genotype in metastasized breast cancer patients compared with controls or patient without metastasis. Nevertheless, longitudinal studies are needed to confirm the role of the MMP3 polymorphism for metastasizing.
Limitations of our study are its retrospective casecontrol design, which could have led to a survival bias, and the fact that some classical breast cancer risk factors such as menarche or number of pregnancies were not retrieved from study probands.
| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Requests for reprints: Peter Krippl, Klinische Abteilung für Onkologie, Medizinische Universitätsklinik Graz, Auenbruggerplatz 15, A-8036 Graz, Austria. Phone: 43-(0)316-385-3315; Fax: 43-(0)316-385-3355; E-mail: peter.krippl{at}klinikum-graz.at
Received 1/ 3/04; revised 2/12/04; accepted 2/18/04.
| REFERENCES |
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