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Molecular Oncology, Markers, Clinical Correlates |
1 Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, and 2 Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland
| ABSTRACT |
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Experimental Design: We investigated expression levels of AIB1 protein and mRNA in pancreatic cancer cell lines and in a series of archival pancreatic adenocarcinoma (n = 78), pancreatic intraepithelial neoplasia (n = 93), pancreatitis (n = 28), and normal pancreas tissues (n = 52). We also determined AIB1 gene copy numbers by fluorescence in situ hybridization in a subset of cases.
Results: In normal pancreas ducts, we rarely found detectable levels of AIB1 mRNA or protein (<6% of the samples). In pancreatitis and low-grade intraepithelial neoplasia, we found an increased frequency of AIB1 expression (>14 and >23%, respectively) relative to normal tissues (P < 0.01). Adenocarcinoma, as well as high-grade intraepithelial neoplasia, showed increased levels as well as the highest frequency of AIB1 expression with >65% of samples positive for mRNA and protein (P < 0.0001 relative to the other groups). An increased copy number of the AIB1 gene, observed in 37% of cancers, may account for a portion of the increase in expression.
Conclusions: AIB1 overexpression is frequent in pancreatic adenocarcinoma and its precursor lesions. On the basis of its rate-limiting role for the modulation of growth factor signals, we propose a major role of AIB1 in the multistage progression of pancreatic cancer.
| INTRODUCTION |
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The nuclear receptor coactivator amplified in breast cancer 1 (AIB1) belongs to the p160/steroid receptor coactivator (SRC) family consisting of SRC-1 (5)
, TIF-2 (GRIP1; ref. 6
) and AIB1 (ref. 7
; ACTR/RAC3/TRAM-1/SRC-3) (8, 9, 10, 11)
. The AIB1 gene is amplified in several human cancers (7
, 12, 13, 14)
. AIB1 enhances the transcriptional activity of a number of nuclear receptors in vitro (7
, 8
, 11)
and is rate limiting for estrogen-mediated growth of MCF-7 human breast cancer cells (15)
. AIB1 overexpression is also positively correlated with the expression of p53 and HER2/neu in breast tumors (16)
. Disruption of p/CIP, the mouse homologue of AIB1, results in a pleiotropic phenotype, including reduced female reproductive function and blunted mammary gland development in mice (17
, 18)
. Interestingly, embryonic tissues from p/CIP-knockout mice show severe defects in the insulin-like growth factor I and growth hormone signaling pathways (18)
. Furthermore, an isoform of AIB1 (
3-AIB1) that is overexpressed in breast tumors strongly enhances epidermal growth factor-mediated transcription in squamous cell carcinoma cells (19)
.
Given these data on the emerging role of AIB1 in human neoplasia, we were interested in determining the expression patterns of AIB1 in pancreatic cancer and in identifying if changes in expression could be correlated with neoplastic progression. Our initial screening revealed high AIB1 protein levels in pancreatic cancer cell lines. Consistent with this, we found nuclear AIB1 highly expressed in human pancreatic adenocarcinoma and also in high-grade PanIN lesions but not in normal pancreatic tissue. Furthermore, an increase in AIB1 gene copy numbers is frequent in pancreatic tumors and likely to be the underlying cause in a subset of pancreatic adenocarcinomas overexpressing AIB1. Thus, selection for AIB1-overexpressing cells represents a frequent and early event in pancreatic tumor development supporting the notion of a growth advantage of cells overexpressing AIB1.
| MATERIALS AND METHODS |
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The pancreatic adenocarcinoma cell line COLO 357 and its sublines L3.6pl and L3.6sl (20) were obtained from Isaiah Fidler (University of Texas M. D. Anderson Cancer Center, Houston, TX). The L3.6pl and L3.6sl cell lines originated from liver metastases in athymic nude mice derived from tumors of COLO 357 cells implanted into the pancreas (L3.6pl) or spleen (L3.6sl; ref. 20 ).
AIB1 genomic status and AIB1 mRNA and protein expression were examined in normal pancreata (n = 52; 19 tumor free organs from autopsies, 33 adjacent normal parenchyma from surgery), chronic pancreatitis (n = 28), a spectrum of PanIN lesions (n = 93), and invasive pancreatic ductal adenocarcinomas (n = 78). A variety of other reference tissues (n = 147) were also present in the study, including several samples each of liver, kidney, colon, stomach, brain, lymphatic tissue, lung, prostate hyperplasia, and others. Briefly, formalin-fixed, paraffin-embedded blocks of surgically resected pancreatic adenocarcinomas, PanIN, pancreatitis, and normal pancreata were retrieved from the surgical pathology files of both institutions; additional histologically documented normal autopsy and surgically retrieved pancreata were retrieved from the autopsy archives of Georgetown University. Pancytokeratin immunohistochemistry (IHC) was performed on a subset of cases to prove general protein integrity in autopsy samples. All tissues had been previously processed and successfully used for routine-diagnostic purposes in the according institute. Both facilities used 10% buffered formalin and established protocols for fixation and embedding. The diagnosis was reconfirmed for each case by a gastrointestinal pathologist (A. Maitra). The grades of PanIN lesions were assigned using a previously described classification scheme (2) . For the purposes of statistical analysis, PanIN-1A and PanIN-1B were classified as low grade (n = 72), and PanIN-2 and PanIN-3 were classified as high grade (n = 21), as described previously (21) . Regular (full-sized) unstained tissue sections were obtained from the Georgetown University cases, whereas tissue microarrays (TMAs) of pancreatic adenocarcinomas and PanINs were constructed from the Johns Hopkins University cases, as described previously (3 , 21) . Of the 78 pancreatic adenocarcinoma analyzed, 10 cases were regular sections (Georgetown University) and 68 cases (Johns Hopkins University) were arrayed in a TMA format. It has been shown that TMAs, containing three or more sample cores for each carcinoma, provide results identical to and representative for those obtained from according whole tissue sections (22 , 23) . We therefore designed our pancreatic adenocarcinoma TMAs with four 1.4-mm cores per tumor; the total number of arrayed adenocarcinoma cores was 272. All PanIN lesions were arrayed, one core per lesion (3 , 21) ; 22 chronic pancreatitis samples were arrayed with 1 to 2 cores each (Hopkins) and 6 were regular sections (Georgetown University). Forty-six of the normal pancreata were present on the cancer and PanIN arrays (Johns Hopkins University) and 6 cases were regular (full-size) sections (Georgetown University).
Western Blotting.
COLO 357, L3.6pl, and L3.6sl cells were grown to 70% confluence in DMEM + 10% fetal bovine serum in poly-2-hydroxyethyl methacrylatecoated dishes. Cells were washed with PBS, lysed [50 mmol/L Tris-HCl (pH 8.0), 150 mmol/L NaCl, 40 mmol/L ß-glycerophosphate-Na, 0.25% sodium deoxycholate, 1% NP40, 50 mmol/L NaF, 20 mmol/L Na PPI, 1 mmol/L EGTA, 1 mmol/L Na3VO4, 1x Complete Protease Inhibitor (Roche Diagnostics Corp., Indianapolis, IN)], and incubated on ice for 20 minutes. Centrifuged lysates supernatant was boiled in SDS-PAGE buffer with reducing agents. Proteins were resolved by electrophoresis on a 4 to 20% Tris-glycine gel and transferred to a polyvinylidene difluoride membrane. The membrane was blocked for 1 hour with 5% milk/PBST (PBS, 0.2% Tween 20). Antibodies were diluted in 5% milk/PBST and incubated each with the membrane for 1 hour. The following primary antibodies were used: anti-AIB1 (1:250; BD Transduction Laboratories, San Diego, CA) and anti-ß-actin (1:3000; Chemicon International, Inc., Temecula, CA). Secondary detection antibodies were part of a commercially available kit (Pierce, New York, NY). Detection was performed with the SuperSignal system (Pierce) and exposure to a photographic film for 5 seconds.
Fluorescence In situ Hybridization (FISH).
To evaluate the gain of AIB1 gene copies, we designed a FISH probe consisting of two overlapping bacterial artificial chromosome clones containing sequences of the AIB1 gene: RP11-109C3 and RP11-456N23 (BACPAC Resources, Oakland, CA). Bacterial artificial chromosome clone DNA was prepared and labeled with Cy3 (Amersham Biosciences, Piscataway, NJ) using nick translation as described previously (24
, 25)
. Correct chromosomal location of the bacterial artificial chromosome clones to chromosome 20q12 was confirmed using standard FISH mapping (24)
. Metaphase spread chromosomes prepared from the cell lines (COLO 357, L3.6sl, and L3.6pl) and one pancreatic tissue microarray were evaluated by FISH using the AIB1 probe as described earlier (25)
. The TMA slide was deparaffinized with xylene, rehydrated with decreasing ethanol concentrations, and pepsin digested for 90 minutes, then denatured in 70% formamide/SSC 2x for 4 minutes at 80°C. After overnight hybridization with the probe at 37°C, the slide was washed three times in formamide/SSC 2x (1:1) at 42°C and three times in SSC 1x at 42°C, then counterstained with 4',6-diamidino-2-phenylindole and embedded in anti-fade solution [200 mmol/L DABCO (1,4-diazobicyclo[2,2,2]-octane) 90% vol/vol glycerol, 20 mmol/L Tris-HCl (pH 8)] to reduce photo-bleaching.
Scoring of cells and digital image acquisition were performed using a x63 objective mounted on a Leica DMRBE microscope (Leica, Wetzlar, Germany) equipped with optical filters for 4',6-diamidino-2-phenylindole and Cy3 (Chroma Technologies, Brattleboro, VT) and a cooled charge coupled device camera (Photometrics, Tucson, AZ). The IPLab software package (Scanalytics, Inc., Fairfax, VA) was used for the initial gray-scale image acquisition and consecutive color processing. Considering artifacts and loss of genomic contents in partially cut nuclei, the following scoring system was used: FISH signals in 50 cells for each specimen were counted. Detection of three or more signals in at least 30% of the nuclei with detectable signals was considered as increased copy number/gain. In the absence of copy number gain, the presence of two FISH signals per cell in at least 50% of the nuclei was considered as normal diploid.
mRNA Detection by In situ Hybridization (ISH).
mRNA expression of AIB1 was assessed by ISH with digoxigenin-labeled riboprobes. A specific 648-bp sequence of the AIB1 cDNA was subcloned into the pcDNA3 vector (Invitrogen, Carlsbad, CA), and digoxigenin-labeled sense and antisense riboprobes were made from the DNA templates using the DIG RNA labeling kit (Roche Diagnostics Corp.) according to the protocol provided. The probe hybridized with the mRNA of AIB1, as well as the isoform
3-AIB1. Tissue slides were stained by ISH using the constructed riboprobes and a previously described protocol (26)
with some modifications: in brief, slides were deparaffinized, tissue-proteins were digested with proteinase K, and acetylated (26)
. The RNA probe was mixed with hybridization solution (1.5 ng probe/1.0 µL solution; Sigma-Aldrich, St. Louis, MO) and incubated with the tissue for 16 to 18 hours at 42°C. Slides were washed and digested with RNase A (Roche Diagnostics Corp.; ref. 26
). Refixation and cross-linking was performed by formamide/SSC 2x (1:1) for 10 minutes at 52°C followed by two 5-minute wash steps at 52°C in SSC 1x and SSC 0.5x. After blocking (26)
, a solution of alkaline-phosphatasetagged anti-digoxigenin antibody fragments (Roche Diagnostics Corp.) in buffer I [100 mmol/L Tris-HCl (pH 7.5) and 150 mmol/L NaCl] (1:250) was applied and incubated with the tissue for 16 to 18 hours at 4°C. Staining solution was applied, consisting of 0.375 mg/mL nitroblue tetrazolium (Roche Diagnostics Corp.) and 0.175 mg/mL 5bromo-4-chloro-3-indolyl phosphate (Roche Diagnostics Corp.) diluted in buffer II [100 mmol/L Tris-HCl (pH 9.5), 100 mmol/L NaCl, and 50 mmol/L MgCl2]. Once sufficient staining was observed, the reaction was terminated by rinsing with buffer III [10 mmol/L Tris-HCl (pH 8.0) and 1 mmol/L EDTA] for 10 minutes. Slides were washed in 0.5% Tween 20 and water for 5 minutes each and then allowed to dry completely before mounting with sealing solution and cover slips.
IHC.
To investigate AIB1 protein expression we performed IHC as described previously (27)
. A monoclonal antibody recognizing the amino acids 376389 of AIB1 (BD Transduction Laboratories) was used as the primary antibody. This antibody also recognizes
3-AIB1 (19)
. Deparaffination and rehydration were performed as detailed for the ISH. The antigen (AIB1) was retrieved by boiling the slides in citrate buffer (pH 6.0) at 100°C for 10 minutes followed by a 20-minute cool down in the solution on the benchtop. Endogenous peroxidase was blocked by 3% H2O2 for 10 minutes. Slides were incubated with the primary anti-AIB1 antibody diluted 1:100 in PBS for 16 to 18 hours at 4°C. Detection was performed using the biotin based Super Sensitive detection system (BioGenex, San Ramon, CA) according to the protocol provided. The staining reaction was terminated by rinsing with double-distilled water. Counterstaining of nuclei was performed by 15-second immersion in Mayer hematoxylin. Tissues were dehydrated with increasing concentrations of ethanol and a final immersion in Xylene 100% before the slides were mounted with coverslips.
Evaluation of mRNA and Protein Expression.
AIB1 mRNA and protein expression were evaluated in the neoplastic cells of pancreatic adenocarcinoma and in the ductal epithelial cells of PanIN and normal pancreata. Both ISH and IHC results were categorized using identical stratifying criteria for ease of analysis. ISH staining was always evaluated in conjunction with the sense (control) probe. Results were categorized on four different levels: negative (): signals comparable with sense probe in intensity (ISH), or cytoplasmic, and/or nuclear labeling in <5% of cells (IHC); low positive (+): weak signals unequivocally exceeding sense probe intensity in 5 to 50% of cells (ISH) or cytoplasmic and/or nuclear labeling in 5 to 50% of cells (IHC); positive (++): strong signals in >50% of the cells (ISH) or strong cytoplasmic and/or nuclear labeling in >50% of cells (IHC); and high positive (+++): intense signals in
100% of cells (ISH) or intense cytoplasmic and/or nuclear labeling in nearly 100% of cells (IHC). The COLO357, 3.6pl, and 3.6sl ISH results and previously stained breast cancer tissue microarrays (data not shown) were also used for comparison during the ISH and IHC evaluation as external controls because AIB1 mRNA and protein expression was known to be present in these samples. Subsequently, this four-tier scheme was converted to a numerical score [ranging from 1 (for negative) to 4 (for +++)] for each examined regular section or tissue microarray core examined. To obtain case results for the cancers with multiple cores on the TMA (68 of the 78 pancreatic adenocarcinoma), we performed additional calculations to consider the heterogeneity of expression frequently observed in adenocarcinoma. We rejected the frequently chosen approach of using only the maximum values of each case to avoid a bias toward high expression results in cancers. Instead mean values were first calculated for each case from all valid core results, resulting in fractional values ranging from 1.00 to 4.00. These were then reassigned to the discrete values 1, 2, 3, and 4 using cutoff values calculated from the statistical distribution of all of the original core values. The resulting recategorized case values had a distribution that was comparable with that of the core values.
Statistical Analysis.
Expression results overall tissue-types were compared using the
2 test analysis on 5 x 4 contingency tables. Expression results between pairs of tissue types (normal pancreas, low-grade PanIN, high-grade PanIN, and cancer) were compared with
2 test for trend analysis on appropriate 2 x 4 contingency tables. Correlation of ISH with IHC results was performed by Spearman nonparametric correlation for paired values of the samples; P value, correlation coefficient (r), and the 95% confidence interval are given.
| RESULTS |
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3-AIB1 (19)
were also detected in all three cell lines by Western blot (Fig. 1C)
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AIB1 mRNA Expression in Tissues, ISH.
To study the levels of AIB1 mRNA expression in human tissues, ISH with digoxigenin-labeled RNA probes was performed with adjacent paraffin sections of the same samples that were used for the IHC. Cytoplasmic staining was evaluated according to the grading system used for IHC. For the tissue sections in our study, a distinct pattern of increase in AIB1 mRNA expression was seen in the ISH for high-grade PanIN lesions and adenocarcinoma versus normal, pancreatitis, and low-grade PanIN lesions. The results were essentially similar to the IHC. Representative ISH staining in different tissues is shown in the right panels of Fig. 2
, and the results are summarized in Table 1D
. No positive staining was present in the duct cells of the 45 normal pancreata but in 9 of the 25 ducts of pancreatitis. This difference was significant (P < 0.0001). Compared with normal duct cells, the lower grade PanIN also showed a significant (P < 0.0001) increase in the number of positive cases (43.1%, 28 of 65 cases) but only 2 of these displayed ++ staining. No difference existed between pancreatitis and low-grade PanIN (P = 0.4). 75% (15 of 20) of the high-grade PanIN and 73.7% (56 of 76) of the adenocarcinoma displayed positive expression.
Higher levels (++ and +++) of expression were more frequently observed in the high-grade PanIN and in the adenocarcinoma. These increases in expression levels were significant for both high-grade PanIN and adenocarcinoma when compared with low-grade PanIN, pancreatitis, and normal tissues (all P < 0.015,
2 test for trend). As observed with the IHC, the expression level distributions were not different between high-grade PanIN and the cancers (P = 0.2). We conclude that AIB1 mRNA expression is already increased in half of the cases of early transformation and that it increases additionally in frequency and levels of expression with later progression.
Correlation of AIB1 mRNA and Protein Expression.
As mentioned before, consecutive serial sections of the whole tissue and TMA paraffin blocks had been used for IHC and ISH. Therefore, it was possible to correlate the ISH and IHC results directly for each sample. Spearman nonparametric correlation showed a highly significant correlation (P < 0.0001, n = 453) and a strong correlation coefficient (r) of 0.65 (95% confidence interval, 0.590.70). Fig. 3A
shows all correlated samples as a 4 x 4 matrix. Cases of mRNA without protein are consistent with variations in the protein translation. Cases of protein without mRNA were mostly observed because of a sensitivity difference between the ISH and IHC. In conclusion, both ISH and IHC represent the increased AIB1 gene expression with similar accuracy.
FISH of Pancreatic Tissues.
Next, FISH analysis was performed on a tissue microarray to assess the AIB1 copy number changes in a subset of cases. Diploid copy number was observed in all of the normal tissues present on the array (n = 11). Fig. 4A
shows a representative example with epithelial cells of a pancreatic duct. In contrast to normal tissues, an increased copy number of the AIB1 gene was observed in 37% of the pancreatic adenocarcinoma cores (17 of 46). In each of these 17 adenocarcinoma cores, at least 30% of the cells analyzed showed a range of AIB1 copies between three and five copies per cell. In the 11 normal tissue cores, no increase in the number of signals was observed, and the majority of the cells with detectable FISH signal showed two copies of the gene. Pancreatic adenocarcinoma cells from one representative case with an average of four detectable gene copies per cell are shown in Fig. 4B
. Although an increase in copy numbers did correlate with mRNA overexpression [n = 50, r = 0.55 (95% confidence interval, 0.320.72), P < 0.0001], no significant direct correlation existed with protein expression (P > 0.2) in the small subset investigated. We conclude from this that little over one third of pancreatic adenocarcinoma harbor an increased number of AIB1 gene copies.
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| DISCUSSION |
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10% (7
, 27)
. Expression is also comparable with other neoplasms in which AIB1 expression has been reported, namely meningioma (30)
and cancers of the prostate (12)
, ovaries (7)
, and head and neck (25)
. Remarkable concordance of AIB1 mRNA and AIB1 protein expression was seen in our samples. Although the mechanisms of AIB1 overexpression in pancreatic cancer remain to be explored, we believe, based on our limited FISH data, that in a subset of cases, gene amplification may be responsible for the high expression levels. Interestingly, AIB1 expression is almost undetectable in the normal pancreata in contrast to normal breast epithelia, where low levels of mRNA expression are seen in 30% of the cases (16) . In addition, we observed in our study that AIB1 protein staining was mostly located in the nuclei of the adenocarcinoma and neoplastic PanIN cells, whereas in positive, normal breast epithelium, a heterogeneous cytoplasmic and nuclear staining pattern was observed (ref. 27 and unpublished data from our lab). On the basis of data emanating from our laboratory and other groups (31) , we believe that the nuclear localization of AIB1 most likely indicates the transcriptionally active form. Our findings suggest that the overexpression of AIB1 might confer a growth advantage to pancreatic ductal epithelial cells in the process of neoplastic transformation. Consistent with this, increased expression of AIB1 is frequent in high-grade PanIN.
The role of AIB1 in tumorigenesis is an active area of investigation. We have shown previously that AIB1 can be rate limiting for estrogen-stimulated proliferation of breast tumors (15) . Obviously, it is unlikely that the primary role of AIB1 in pancreatic cancer is related to estrogen because this receptor does not seem to play a major role in pancreatic cancer development (32) . It has also been reported that AIB1 correlates with HER2/Neu overexpression in breast cancers (ref. 16 and our unpublished data), yet none of the tumors in our study was overexpressing HER2/Neu (determined during diagnostic immunohistochemistry; data not shown). However, AIB1 has a broad spectrum of nuclear receptors that it can coactivate, and it is possible that the potentiation of these might be involved in pancreatic cancer development. Recently, a number of laboratories, including ours, have determined that AIB1 is rate limiting for insulin-like growth factor I and epidermal growth factor signaling in cancer cell lines (Ref. 19 and Oh et al.3 ). This is also consistent with the p/CIP (mouse AIB1)-knockout mouse that loses responsiveness to insulin-growth factor I (18) . Interestingly, the proliferation of pancreatic cancer is also known to depend highly on growth factor signaling, and a number of the receptors or ligands are overexpressed in this cancer. Insulin-like growth factor I receptor and epidermal growth factor receptor are most notable among these (33, 34, 35) . It is therefore possible that clones with high levels of AIB1 expression are selected for during progression of pancreatic cancer because these might be expected to be sensitized to proliferation and invasion driven by growth factors via autocrine and/or paracrine mechanisms.
We conclude that the role of AIB1 is not limited to hormone-sensitive tumors, namely meningioma (30) and breast (7 , 27) , prostate (12) , and ovarian cancer (7) , but that it may also be significantly involved in pancreatic cancer pathogenesis, as evidenced by the frequent overexpression of AIB1 protein and mRNA. The up-regulation of nuclear AIB1 protein and increased AIB1 gene copy numbers in precursor lesions of pancreatic adenocarcinoma, especially high-grade lesions, hold promise as a potential diagnostic tool in small biopsy or exfoliative cytology specimens. For such samples, distinction from clinicopathological mimics such as chronic pancreatitis is critical. Because <15% of pancreatitis samples show low positive AIB1 protein staining, high levels of AIB1 protein (especially with pronounced nuclear localization) might serve as an important diagnostic indicator.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Note: A. Maitra and A. Riegel contributed equally to the direction and oversight of the project.
Requests for reprints: Anna T. Riegel, Georgetown University, LCCC Research Building E307, 3970 Reservoir Road NW, Washington, DC 20057. Phone: (202) 687-1479; Fax: (202) 687-4821; E-mail: ariege01{at}georgetown.edu
3 A. Oh, H.-J. List, R. Reifer, et al. The nuclear receptor coactivator AIB1 mediates IGF-1induced phenotypic changes in human breast cancer cells, submitted for publication, 2004. ![]()
Received 3/22/04; revised 6/ 4/04; accepted 6/17/04.
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