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Molecular Oncology, Markers, Clinical Correlates |
1 Unit of Toxicology and Chemotherapy, German Cancer Research Center, Heidelberg, and 2 Department of Surgery, Municipal Hospital Nürnberg Nord, Nürnberg, Germany
| ABSTRACT |
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| INTRODUCTION |
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30,000 patients succumb to this malignant disease. When these figures are related to the total incidence of malignancy, CRC ranks third after lung and prostate carcinoma for men and second after mammary carcinoma for women. Regarding mortality, CRC ranks second place for all of the malignancies in both sexes (1)
. The 5-year overall survival rate declines with increasing cancer stage. In the early stages [Unio Internationale Contra Cancrum (UICC) I and II] the 5-year survival rate ranges from 70 to 90%, whereas the prognosis deteriorates in advanced stages (50% in UICC III and 525% in UICC IV). This implies that 2030% of patients who are in early stages of cancer development and undergo resection with curative intent will suffer from metastatic recurrence. Metastasis is caused by tumor cells that are shed into the blood or lymph vessels and are disseminated into peripheral organs before or during surgery. These so called isolated (disseminated) tumor cells (ITC) are tracked by immunohistochemistry, reverse transcription-PCR, and various other methods to assess their distribution and prognostic value (2 , 3) . The expression of carcinoembryonic antigen, cytokeratins, or guanylyl-cyclase C has been used as diagnostic marker for detecting ITC in organs such as lymph nodes (2) , blood, and bone marrow (3) . Up to now, several studies have been performed, but the metastatic potential of cells that are identified by cytokeratins or carcinoembryonic antigen in body compartments is still contested. Studies on cytokeratins/carcinoembryonic antigen from Greenson et al. (4) , Liefers et al. (5) , and Isaka et al. (6) showed that patients harboring ITC in lymph nodes have a worse prognosis than patients without ITC, whereas other investigations using the same biomarkers did not show a significant change in prognosis when ITCs were diagnosed in this tissue (7, 8, 9, 10, 11) . Another possibility for identifying ITCs or micrometastasis is the detection of nucleic acids, harboring tumor-specific gene mutations, which correspond to those in the primary tumor. In the development of sporadic CRC, K-ras mutations occur early and with high incidence (3060%) in the multistep process of colorectal carcinogenesis (12) . Hot spots for mutations in codons 12, 13, and 61 of the K-ras gene can be used for convenient detection of tumor cells (13 , 14) . A relation between the presence of K-ras mutations in the primary tumor and a poor prognosis has been shown by some studies (15, 16, 17, 18, 19, 20) , but not by others (21 , 22) .
The liver functions as a primary filter for colorectal tumor cells shed into the blood and is the main target organ of CRC metastasis. However, there are only a few studies that have attempted to detect isolated tumor cells within this organ. De Kok et al. (23) probed for ITCs by seeking K-ras mutations in bile obtained intraoperatively from patients with known liver metastasis, but succeeded only in 20% of patients with K-ras mutated tumors. Schimanski et al. (24) investigated K-ras mutations in liver biopsies of patients at various CRC stages. A modified PCR-RFLP assay was used for detection, which had been originally established by Norheim-Andersen et al. (14) . With this method a third of all patients with K-ras mutated primary tumors were found to harbor ITCs showing K-ras mutation in the liver identical to the primary tumor (24) . A follow-up of these patients has demonstrated that the presence of ITCs in the liver has a negative bearing on tumor recurrence and patient survival.3
The aim of this prospective study was to extend these results, by comparing the incidence of ITCs in the liver with that in lymph nodes and bone marrow in a relevant number of patients. Furthermore, a quantitative PCR assay was used to investigate the relation between the extent of mutated K-ras alleles and parameters of tumor aggressiveness. Finally, we explored whether results on the presence of mutated K-ras alleles can vary between tumor regions and to what extent such a difference can contribute to misclassification of tumor K-ras mutation status.
| MATERIALS AND METHODS |
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Cell Cultures.
Three human CRC cell lines (HT-29, HDC-8, and SW-620), and one mammary carcinoma cell line (MDA-MB231) were used as controls for PCR-RFLP and generating standards for quantitative PCR. HT-29 cells (DZSM No. ACC 299; K-ras wild type) were grown in Mc Coys medium (Sigma, Munich, Germany), SW-620 cells (American Type Culture Collection No.CCL-227; K-ras codon 12 mutated) were grown in Leibowitz L15 medium, HDC-8 (established previously by Brüderlein et al.; Ref. 25
; K-ras codon 12 mutated) and MDA-MB 231 cells (American Type Culture Collection No. HTW-26; K-ras codon 13 mutated) were grown in RPMI 1640. Media supplemented with 15% fetal bovine serum (Sigma) and L-glutamine (2 mM), were used to cultivate the cells under standard conditions (humidified atmosphere, 5% CO2 in air, 37°C).
Sensitivity Assays.
Serial dilutions of K-ras mutated (HDC-8; MDA-MB-231) in wild-type cells (HT-29) were based on cell counts and ranged from 1:0 to 1:106 K-ras mutated to wild-type cells. For serial dilutions in mucosa and liver, the weight of these tissues was used by assuming that 100 mg of tissue corresponded with 108 cells.
DNA Isolation.
Tissues were disrupted in lysis buffer (2 ml of buffer QRL1 from Qiagen, Hilden, Germany) using a 5 ml homogenizer (Braun, Melsungen, Germany). DNA was isolated using the DNA/RNA-isolation kit from Qiagen according to the manufacturers recommendations. In brief, proteins were precipitated by an equal volume of QRV1 buffer. Thereafter nucleic acids were pelleted by adding 0.8 volumes of isopropanol to the clear supernatant. The nucleic acid pellet was dissolved in QRL1 and QRV2 buffers (ratio 1:9) and loaded onto a column. Under these conditions, RNA is retained on the column and the eluate can be collected for later DNA isolation. RNA was washed on the column (buffer QRW) and then eluted with preheated (45°C) QRU buffer. RNA was pelleted by adding an equal volume of ice cold isopropanol and centrifuging at 15,000 x g (30 min; 4°C). The pellet was washed twice with 70% ethanol and finally air-dried. Thereafter, the eluate was loaded onto the column, and the DNA was treated in an analogous way with QC wash buffer, preheated (45°C) QF elution buffer, 0.7 volumes iso-propanol, and 70% ethanol. The amount of isolated nucleic acids was determined spectrophotometrically (Gene Quant II; Pharmacia, Freiburg, Germany).
Detection of K-ras Mutations.
Detection of K-ras mutations in codons 12 and 13 was performed by PCR-RFLP on all available tissues of the 199 CRC patients as described before (24)
. Briefly, 300 ng of DNA were used as a template for the first PCR, which consisted of a 50 µl volume containing 0.35 units of Red-taq DNA polymerase, 5 µl 10x Red-taq PCR reaction buffer (Sigma-Aldrich, Steinheim, Germany), 0.2 µM deoxynucleotide triphosphates (MBI Fermentas, St. Leon-Roth, Germany), and 0.2 µM of the oligonucleotide primers Ras A and Ras B (see Table 1
). For amplification, a DNA Engine PTC200 (MJ Research, Watertown, MA) thermocycler was used under the following conditions, initial denaturation (4 min at 95°C), followed by 30 cycles of denaturation (1 min at 94°C), annealing (1 min at 52°C), and elongation (2 min at 72°C). After the last cycle, a final extension (5 min at 72°C) was added, and thereafter, the samples were kept at 4°C. The first PCR generated an amplicon of 166-bp length.
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For the first restriction, 10 µl of the first PCR reaction were digested with 10 units of either BstXI for codon 12 detection (55°C, 4 h), or XcmI for codon 13 detection (37°C, 4 h), in a total volume of 20 µl, according to the manufacturers recommendations. Two µl of this first digest were used as a template for the second PCR in which primer Ras C (Table 1)
was used instead of Ras B, thus creating a restriction site in both mutant and wild-type amplicons for enzymes BstXI and XcmI. The second PCR was run under the same conditions. Because of the nested antisense primer (Ras C), the second PCR generated a fragment of 152 bp. For the second restriction, 10 µl of the second PCR were digested under the same conditions as for the first digest.
A sample of the second digest (18 µl) was run on a polyacrylamide gel (Roth, Karlsruhe, Germany), stained with ethidium bromide and analyzed under UV-light using a video densitometer (Herolab, Wiesloch, Germany). Amplicons of mutated DNA were cut only once into fragments of 134 bp and 18 bp, whereas amplicons of wild-type DNA were cut twice into fragments of 106-, 28-, and 18-bp length.
Controls.
DNA from cell lines HDC-8, MDA-MB231, and HT-29 was used as standards to control for the efficacy of the restriction enzymes. Autoclaved, double-deionized water was used as a negative control. To discriminate mutant bands from background, the aperture of the video camera was increased such that faint bands from K-ras wild-type controls disappeared. Only bands that remained visible after this background reduction were counted as mutant bands.
DNA Sequencing.
Bands of 134 bp length, indicating mutated DNA, were excised from 3% high resolution agarose gels (Sigma-Aldrich). The amplicons were purified using the Qia Quick gel extraction kit according to the manufacturers recommendations (Qiagen). In brief, the gel slice was dissolved by adding 6 volumes of QG buffer and incubating at 50°C for 10 min. Thereafter 1 volume of isopropanol was added, and the sample was loaded onto a column. After washing with QG and PE buffers, the DNA was eluted with Tris buffer [10 mM Tris-Cl (pH 8.5)]. A sample of the purified amplicon (12.8 µl) was used for sequencing, which was performed with 4 µl of the Big Dye Terminator Cycle Sequencing Ready Reaction kit (ABI, Weiterstadt, Germany) according to the manufacturers recommendations and 3.2 µl of sequencing primer RasSeq (Table 1)
. The reaction resulted in a product of 110 bp, which was analyzed on an ABI 310 Sequencer for point mutations of the respective amplicon.
Preparation of the Internal Standard.
DNA from cell lines SW-620, K-ras mutated in codon 12, and MDA-MB231, K-ras mutated in codon 13, were used to prepare internal standards for each mutation analyzed. As shown in Fig. 1
, the two primer pairs, IS-A and IS-B (sequences are shown in Table 1
), were used, amplifying human K-ras gene fragments of 162 bp (A) and 115 bp (B) in length. Primer IS-A(3') and IS-B(5') each contained a restriction site for the enzyme HindIII (underlined sequence). The amplified fragments were separated on a 2% high-resolution agarose gel (Sigma). After staining with ethidium bromide, the corresponding fragments were excised and extracted with the Qia quick gel extraction kit (for details see above). The two fragments (0.5 µg each) were incubated with 5 units HindIII (MBI Fermentas) at 37°C for 4 h. The resulting fragments (A' and B') with sticky ends were cleaned with the PCR purification kit (Qiagen) and then ligated (0.25 µg each) by incubation with 0.5 units of T4-ligase (Boehringer, Mannheim, Germany) at 16°C for 12 h. The resulting amplicon (C, 263 bp) was again isolated from a 2% agarose gel. For additional amplification the primer pair, IS-C, was used, resulting in a 244-bp oligomer (D). In comparison with the K-ras wild-type sequence it contained a 10-bp deletion and was used as internal standard in the subsequent experiments.
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| RESULTS |
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Classification of Tumor Stage, Nodal Involvement, and Distant Metastasis.
The majority of carcinomas were classified as tumor stage T3 (63%), with the remaining tumor stages being together observed less frequently (37%). There was no significant gender difference.
As assessed by histology, 59% of all of the tumors did not show tumor cell dissemination into regional lymph nodes. About 20% were ranked into the classes N1 (three or less involved lymph nodes) or N2 (more than three lymph nodes positive for tumor cell infiltration), respectively. Again, there was no significant gender difference.
Clinical metastasis (M) was found in 18% of all patients; again, there was no significant gender related difference.
UICC Status and Additional Histopathologic Parameters.
According to the UICC status, the higher percentage of patients was grade II (36%) followed by grade III (27%), and grades I (19%) and IV (18%). Relative to this distribution, there was no significant gender difference. The majority of patients were resected successfully, i.e., no residual tumor could be detected histologically at the margins of the resection (R0; 83%). From those patients with residual tumor load (R), the R2 status (15.6%) prevailed over those with R1 status (1.5%). The majority of the tumors were classified into histological grades G2 (81%) and G3 (18%). Histology of the surrounding tumor tissue showed that only a minority of tumors (24%) had eroded venous vessels (V). There was a significant increase in the ratio of tumors associated with venous arrosion and tumor-size according to the Tumor-Node-Metastasis system (T1: 0/6, 0%; T2: 4/44, 9%; T3: 31/126, 25%; T4: 14/24, 58%; P = 0.006). In contrast to vascular invasion, the majority of tumors (88%) showed lymphatic vessel invasion (L).
K-ras Mutations in Tumor Samples.
The distribution of tumors within the colorectum relative to their mutation status is shown in Fig. 5
. Seventy-four of 201 (37%) tumors were mutated in K-ras codons 12 and 13. This ratio was relatively constant in four of six parts of the colorectum, with the exception of the cecum (54% mutated tumors) and the descending colon (20% mutated tumors). Both deviations are probably due to the few tumors found within these regions of the colorectum.
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The respective type of mutation is described in Table 3
. Most prevalent were the mutations GGT
GAT (Gly
Asp; 35%) and GGT
GTT (Gly
Val; 32%) for codon 12 and GGC
GAC (Gly
Asp; 19%) for codon 13.
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1%. Conversely, 20 of 74 tumors (27%) had a ratio of K-ras mutated cells <1%. There was no significant difference in this distribution when codon 12 and 13 mutations were compared. However, patients
80 years of age (n = 4) had a significantly higher ratio of K-ras positive alleles than younger patients (P = 0.037). With an increasing ratio of ras mutated cells there was a trend for an association with nodal involvement (P = 0.11), as well as for patients with venous invasion (P = 0.10). Finally, patients with residual tumor load (R1/2; P = 0.028) and patients with distant metastasis (M1; P = 0.057) were significantly correlated with a high percentage of K-ras-mutated tumor cells.
K-ras Mutations in Extratumoral Tissues.
An overview on patients with a K-ras mutation in mucosa, liver, and/or lymph node samples is shown in Table 4
. From the 15 patients listed, 11 were male and 4 female. Their mean age did not differ significantly from that of the total collective. Twelve patients had a codon 12 mutation in their carcinoma, 1 patient a codon 13 mutation, and 2 patients were apparently wild-type. The latter 2 patients were included because 1 had a codon 12 mutation in normal-appearing mucosa and the other a codon 12 mutation in a lymph node. Gels from 2 of the male patients with codon 12 mutations are shown in Fig. 6
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There were more liver DNA samples with K-ras mutations (n = 8) than lymph node (n = 6) and bone marrow DNA samples (n = 0). These differences were significant when comparing the number of positive bone marrow samples with that of the liver (P < 0.004) and the lymph nodes (P < 0.02).
A comparison of the ratio of K-ras mutated versus wild-type cells in tumors that gave rise to ITCs with that of primaries without detectable ITCs showed no significant difference. However, the ratio of mutated cells was significantly lower in liver and lymph node tissues (P = 0.04) than in their corresponding primary tumors. This indicates that specimens from distant organs were in fact taken from normal-appearing tissue.
Fifty-seven of the 74 patients (77%) with K-ras mutation were clinically diagnosed as M0. Of these, 3 patients (5.3%) were found to carry K-ras mutated alleles in normal-appearing tissue. Conversely, from the 17 of 74 patients (23%) diagnosed clinically as M1, the majority (n = 9; 53%) were found to carry K-ras-mutated alleles in normal-appearing tissue.
K-ras Heterogeneity in Tumors.
Tumors are likely to represent multiple clones, some of which could differ in their K-ras mutation status. To assess the possible influence of this on the results of the PCR-RFLP assay used, a series of 18 patients was used to compare the assay results for five different parts of the tumor. As shown in Table 5
, analysis of the standard central sample of 18 tumors resulted in 8 K-ras-mutated and 10 wild-type tumors. Additional analysis of 4 peripheral samples per tumor, respectively, showed that 1 of the 8 mutated tumors was heterogeneous, as 2 of the 5 samples from this tumor were wild-type. Similarly, 1 of the 10 wild-type tumors was heterogeneous, as 1 of the 5 samples of this tumor was mutated. Thus, the increased diagnostic expense contributed to a 6% increase in tumors diagnosed K-ras positive and to assessing 11% of all tumors as representing multiple clones.
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| DISCUSSION |
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ITCs in Extratumoral Tissues.
The three tissues examined for ITC showed significant differences in the incidence of K-ras-mutated cells. According to its function as a primary filter for hematogenic spread of colorectal tumors, the liver showed a significantly increased incidence of ITCs compared with the bone marrow (11% versus 0%). When contrasting the liver tissue incidence of ITCs with that of a previous study (26%),3
it is unclear why the detection rate varied by 15%. With regard to detecting ITCs in liver, with or without concomitantly known metastasis, the variation was low in the former (53% versus 54%) but high in the latter group of patients (5% versus 17%; P = not significant). Reasons for this difference could be attributed to the following: (a) the evaluation of the PCR-RFLP assay was altered to exclude bands that could not be readily discriminated from background; (b) patients of this study were in a clinically less advanced stage than in the previous survey;3
(c) the polymerase used in this study produced a slightly higher background than that used before, thus obscuring the presence of faint positive bands; and (d) the differences observed are not significant and may be related to the relatively few patients investigated.
Combined analysis of the present and the former study on patients with ITCs in clinically inconspicuous liver, however, yields a mean incidence of 14% and, thus, indicates a notable percentage of patients with distinctly elevated probability of developing early metastasis.3 The identification of a subgroup of clinically inconspicuous patients with ITCs implies that a suitable therapy could be found to counteract their increased risk to develop overt metastasis. A comparison of the detection rates of hematogenic and lymphogenic spread showed that the former prevailed over the latter, but this difference was not significant. The incidence of K-ras mutations found in lymph nodes (7%) may be because tissue from the para-aortic region was selected for this analysis and thus corresponds, if positive, to stage M1. This, in turn, could indicate that the lymphatic colorectal carcinoma spread is no longer confined to the surgically resected area and would imply an increased risk of developing early metastasis. Combined analysis of both hematogenic and lymphogenic spread shows that 4 of those 12 patients with ITCs identified in liver or lymph nodes (33%) would merit an upgrade in their histopathological staging, and, therefore, could be designated as "i" according to Hermanek (28) . In contrast, analysis of bone marrow samples did not contribute to knowledge about ITCs. The reason for this failure probably is that the detection limit of the PCR-RFLP method used was higher than the presumably very low concentration of K-ras-mutated cells in the bone marrow of patients investigated. Nevertheless, it can be deduced that a possible contamination of bone marrow with K-ras-mutated cells was below that of the liver and/or the lymph nodes, and, therefore, could be regarded of minor importance. To improve the sensitivity of the method, it appears necessary to enrich epithelial cells to detect K-ras mutations in bone marrow. Such a procedure, however, has resulted in detection of a high percentage of mutations, which are unrelated to that of the primary tumor (29) and, therefore, their relevance can be questioned.
Other groups have reported on K-ras mutations detected in tumor drainage blood (30) . Such results may have potential to define the level of risk to develop metastases at distant sites and for selecting adjuvant therapies. Although of interest, this procedure has two potential drawbacks: first, it determines the temporal concentration of ITCs, which is prone to fluctuation, due to the nature of the blood compartment. Second, cancer cells found in this compartment may be ineffective in homing into distant organs, as estimated by Barbera-Guillem et al. (31) , who found that only 0.68% of all malignant cells present in the blood are able to home into an organ and that only 19% of these cells will be able to grow into tumor nodules. In contrast with blood, organs such as liver, lymph nodes, and possibly bone marrow harbor tumor cells that have undergone a preselection and are potentially able to form micrometastasis. Furthermore, ITCs contaminating peripheral organs might have accumulated over time and, thus, represent a result of various phases of tumor cell shedding, which is independent of the actual blood concentration.
To differentiate between ITCs and micrometastasis, a quantitative PCR-approach seemed advisable for the subgroup of patients with K-ras-mutated primary carcinomas. Our results on both primary tumor and normal-appearing tissue of target organs of metastasis indicate that few tumors were monoclonal with regard to K-ras mutation, as has also been reported by others (32) . The majority of primary tumors contained at least 1% of K-ras mutated alleles. This, in turn, was the upper limit for most of the tissues with metastatic load (12 of 13).
K-ras Mutation and Tumor Aggressiveness.
The quantitative results also demonstrate that a high ratio of K-ras-mutated primary tumor cells is significantly related to increased aggressiveness, as evinced by the significant relationship with residual tumor load and distant metastasis. Also, a trend exists for a relationship with nodal involvement and venous invasion. Although a final evaluation can only be conducted after knowledge of the patient outcome, these results correlate very nicely with experimental findings that mutations of the Kirsten ras gene may contribute to malignancy predominantly through effects on angiogenesis, invasion, and metastasis (33)
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No relationship was found between the type of mutation and histological parameters of tumor aggressiveness. In concordance with other groups, G:C to A:T transitions prevailed over G:C to T:A transversion mutations (34) . The percentage of all G:C to A:T transition mutations (58%) corresponds well to that collated by others for p53 gene mutations in colorectal carcinoma (63%; Ref. 35 ). Reasons for this base exchange include the formation of guanine adducts (e.g., O6-methylguanine and N2,3-ethenoguanine; Refs. 35 , 36 ) at the transcribed strand, leading to mispairing with thymine, as well as of deamination of cytosine on the coding strand, which leads to uracil mispairing with adenine. In addition, formation of 1,N2-ethenoguanine that has only been detected in vitro thus far can direct misincorporation of thymine, which would explain the transversion mutation (G:C to T:A; Ref. 37 ).
Multiple Tumor Samples and Heterogeneity.
Although 85% of tumors showed heterogeneity toward their K-ras status (here defined as a ratio of mutated:wild-type cells below 1), our results on tumor sampling indicate that only 6% of these tumors were misclassified by analyzing a single sample taken from the center of the tumor. This indicates a sufficient reliability and sensitivity of the PCR-RFLP test procedure and could be a solid reason to screen only one tumor sample in future studies, as well as only those tissues that are derived from patients with K-ras-positive tumors. This deduction is corroborated by the fact that only 1 of 434 investigated tissues was found positive for a K-ras mutation, although the primary tumor was K-ras negative.
Our results demonstrate that detection of K-ras-mutated cells by PCR-RFLP identifies tissues contaminated with ITCs of the primary carcinoma. The ratio of K-ras mutated versus wild-type cells was higher in tumor than in K-ras-positive tissues and was significantly correlated with residual tumor load and distant metastasis. In accord with its function as a primary filter for colorectal carcinoma cells shed into the blood, the liver was found positive for K-ras-mutated cells more often than the bone marrow. The reliability and sensitivity of the method implies that future studies involving K-ras detection for identification of ITCs can be restricted to tissues of patients with K-ras-positive primary tumors.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Requests for reprints: Martin Berger, Unit of Toxicology and Chemotherapy, German Cancer Research Center, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany. Phone: 49-6221-423310; Fax: 49-6221-423313; E-mail: M.Berger{at}Dkfz-Heidelberg.de
3 U. Linnemann, C. C. Schimanski, C. Gebhardt, and M. R. Berger. Prognostic value of disseminated colorectal tumor cells in the liver: Results of follow-up examinations. Int. J. Colorectal Dis., in press. ![]()
Received 11/ 8/02; revised 8/29/03; accepted 10/20/03.
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