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Molecular Oncology, Markers, Clinical Correlates |
1 Laboratory of Oncology, 2 Service of Epidemiology and Biostatistics, 3 Department of Hematology-Oncology, and 4 Service of Pathology, Istituto Gaslini, Genoa, Italy; 5 Azienda Ospedaliera Meyer, Florence; 6 Service of Pathology, Ospedali Civili di Brescia, Brescia, Italy; 7 Laboratory of Tumor Genetics, Istituto Nazionale per la Ricerca sul Cancro, Genoa; Italy
| ABSTRACT |
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Experimental Design: BM aspirates, trephine biopsies, PB, and peripheral blood stem cell (PBSC) samples from Italian children with neuroblastoma were analyzed by morphological and histologic techniques, as well as by immunocytochemistry (IC) for disialoganglioside GD2 and reverse transcription-PCRs (RT-PCRs) for tyrosine hydroxylase (TH) and pgp9.5 genes. The diagnostic odd ratio (DOR) was used to measure the accuracy of the different techniques.
Results: A total of 2,247 evaluations were done on 561 BM, 265 PB, and 69 PBSC samples from 247 patients. IC showed the best accuracy. Whereas TH RT-PCR accuracy was satisfactory, that of pgp9.5 was very low. Positive results obtained by IC in BM and PB samples at diagnosis from stage 1, 2, and 3 patients correlated with unfavourable outcome. No correlation was found between positive results obtained by IC or TH RT-PCR in BM, PB, and PBSC samples from stage 4 patients and their outcome.
Conclusions: Because of its elevated diagnostic accuracy, IC may represent a useful adjunct to conventional morphological techniques, especially in view of its potential prognostic role in patients with localized disease. Longitudinal multicenter studies are warranted to definitely establish the clinical usefulness of TH RT-PCR.
| INTRODUCTION |
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Despite the limited sensitivity of these techniques, routine use of alternative modalities for tumor cell detection has not been recommended (3) . However, it has been shown that the presence of >100 NB cells of 105 BM hematopoietic cells at the end of induction therapy, as assessed by immunocytochemical analysis, and the presence of NB cells in the peripheral blood (PB) at diagnosis, as assessed by molecular analysis, are independent unfavorable prognostic factors in NB patients (4, 5, 6) . Similarly, increasing evidence suggests that NB relapses may be associated with peripheral blood stem cell (PBSC) contamination (7, 8, 9, 10) , and gene-marked tumor cells present in BM grafts have been detected at relapse (11) .
Thus far, two different techniques, namely immunocytochemistry (IC) and reverse transcription-PCRs (RT-PCRs), have been used to identify the small number of neuroblasts in BM or PB samples. Several markers have been tested, including GD2 (12) , a disialoganglioside expressed on the surface of NB cells, which is detected by IC, tyrosine hydroxylase (TH; ref. 13 ), the first enzyme involved in catecholamine synthesis, and pgp9.5 (PGP), a neuron-specific enolase terminal carboxyl-hydrolase (14) , both of which are detected by RT-PCR.
However, no direct comparison of these techniques has yet been done in a large descriptive repeated survey on different types of samples collected at different times during the course of disease. In the present study, we have initially assessed the analytical sensitivity and specificity of IC for GD2 and of RT-PCR for TH and PGP genes in spiking experiments and in BM samples from leukemia patients. Thus, independent investigators have evaluated blindly the presence of metastatic NB cells in BM, PB, and PBSC samples from NB patients using different techniques. The aims of the study were (a) to evaluate the diagnostic accuracy of different techniques in detecting the presence of metastatic NB cells and (b) to correlate positive results obtained at several disease course time points using different techniques with patient clinical features and outcome.
| MATERIALS AND METHODS |
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Diagnosis and staging were done according to the International Neuroblastoma Staging System (2) . After relapse or progression, if any, second line regimens were individually tailored, depending on biological and clinical features. For each patient, clinical and demographic data were available from the National Neuroblastoma Study Group Database.
Timing of Sample Collection.
BM (aspirates or trephine biopsies), PB, or PBSC samples were collected after informed consent from the patients themselves or their legal guardians, according to the Helsinki declaration. Samples were collected at diagnosis, during therapy, at the time of PBSC harvesting, post-myeloablative therapy (MAT) and off-therapy according to protocol guidelines. When possible, additional samples were collected in case of relapse.
Bone Marrow Trephine Biopsies.
BM trephine biopsies, taken from both iliac crests, were reviewed after H&E staining. A biopsy was considered positive when neuroblasts were detected in at least 1 of 10 sections of any biopsy. Hereafter, morphological analysis of bone biopsies will be referred to as "histology."
Bone Marrow Aspirates.
BM was aspirated from both iliac crests (one or two samples for each crest, i.e., anterior and/or posterior) and slides immediately prepared. Three slides for each aspirate were then examined at low magnification, and evaluation of BM morphology was considered positive when neuroblast aggregates were detected in at least one of six slides. At every BM evaluation, the BM aspirates from iliac crests were pooled; one-half was used for IC analysis and the other half was processed for RNA extraction.
PB Samples.
When possible, 2.5 and 5 mL of heparinized PB were collected at the moment of BM evaluation and used for IC analysis and RNA extraction, respectively.
PBSC Samples.
In patients selected according to protocol guidelines, PBSCs were collected by leukapheresis at the time of hematologic recovery, after induction chemotherapy and mobilization with granulocyte colony-stimulating factor. Harvested PBSCs were subsequently reinfused after MAT. For each PBSC, samples of 5 x 106 and 1 x 107 cells were used for IC analysis and RNA extraction, respectively.
Evaluation of GD2 Expression by Immunocytochemistry.
Six cytospins of 17-mm diameter, containing 5 x 105 cells/slide, were prepared from pooled BM aspirates, PB and PBSC samples. Cytospins fixed in cold acetone were incubated with the 3F8 anti-GD2 monoclonal antibody (kindly donated by Dr. Nai-Kong Cheung, Memorial Sloan-Kettering Cancer Center, New York, NY). After washing, slides were sequentially incubated with a biotinylated antimouse immunoglobulin antibody and an avidin-alkaline-phosphatase conjugate (DAKO, Copenhagen, Denmark). Slides were scored for positive cells after substrate development. GD2 IC was considered positive when at least 5 cells of 106 total examined cells scored positive.
Evaluation of TH and PGP Gene Expression by RT-PCR Analysis.
We extracted total RNA from pooled BM aspirates, PB, and PBSC samples from 1 x 107 mononuclear cells using the RNeasy Blood kit (Qiagen, Cologne, Germany). One µg of RNA was reverse transcribed by the first-strand cDNA synthesis kit (Clontech, Palo Alto, CA), according to the manufacturers recommended procedure. cDNA (10 µL) was separately amplified, in a final volume of 50 µL with 2.5 units Taq gold polymerase (Applied Biosystem, Foster City, CA), with primers specific for TH, PGP, or the GAPDH housekeeping gene. Two µl of the first PCR reaction were then amplified with TH and PGP gene-specific primers, internal to those used in the first round. The amplification products were analyzed in a 2% agarose gel stained with ethidium bromide. Primer sequences for TH gene were as follows: outer forward, 5'-TGTCAGAGCTGGACAAGTGT-3'; outer reverse, 5'-GATATTGTCTTCCCGGTAGC-3'; inner forward, 5'-ACCAAGTTCGACCCTGACCTGGAC-3'; inner reverse, 5'-CCCTTCAGCGTGGTGTAGACCTCC-3'.
Primer sequences for PGP gene were as follows: outer forward, 5'-AGATCAACCCCGAGATGCTGAACAAAGTGCTG-3'; outer reverse, 5'-ATTAGGCTGCCTTGCAGAGAGCCACGGCAGAGAA-3'; inner forward, 5'-GCTGCTGTTTCCCCTCAC-3'; inner reverse, 5'-CACCGGAAAAGGCATTCG-3'.
Both rounds of amplification were done for 35 cycles with the following profiles: TH first round, 94°C 1 minute, 55°C 1 minute, and 72°C 1 minute; TH nested, 94°C 1 minute and 72°C 2 minutes; PGP first round, 94°C 1 minute, 60°C 1 minute, and 72°C 2 minutes; PGP nested, 94°C 1 minute, 60°C 1 gene minute, and 72°C 1 minute. We did PCR reactions for GAPDH using the primers supplied in the cDNA synthesis kit (Clontech), according to the manufacturers instructions.
Negative and positive controls, run with each set of samples, were total RNA extracted from PB mononuclear cells of healthy donors and from the IMR-32 NB cell line, respectively. In the spiking experiments, specificity of the amplified products was assessed by direct sequencing done with the Dye Terminator Cycle Sequencing kit (ABI PRISM; Perkin-Elmer Applied Biosystem, Norwalk, CT). Sequences were resolved and analyzed on the ABI 373A Sequence Apparatus (Perkin-Elmer Applied Biosystem).
RT-PCRs were considered positive when the values of densitometric scanning of the specific amplification product, done with Hewlett-Packard ScanJet 4C (Hewlett-Packard, Palo Alto, CA), was higher than mean + 2SD of the values of negative samples run in the gels. Variability among densitometric values of negative samples did not exceed 3%. The definition of positivity used herein refers to the results obtained after the nested PCRs.
Statistical Analysis.
All results obtained with the different techniques were evaluated by four independent researchers (M. V. C. for RT-PCR, L. B. F. for IC, C. R. for morphology, and F. C. for histology) and collected in the National Neuroblastoma Study Group Database.
Descriptive statistics were reported in terms of medians, minimum and maximum value for quantitative variables, and absolute frequencies and percentages for qualitative data. Furthermore, 95% exact binomial confidence intervals [95% confidence interval (CI)] were calculated for frequency data. Comparison of frequency data between categories of patients (i.e., <12 months of age/
12 months of age) were done by
2 test or Fishers exact test, when expected frequencies were <5.
The diagnostic accuracy of each technique was evaluated by calculating the sensitivity, the specificity, and the diagnostic odds ratio (DOR; ref. 16 ). The DOR of a test is the ratio of the odds of positivity in diseased subjects relative to the odds of positivity in the nondiseased. The value of DOR ranges from 0 to infinity, with higher values indicating better discriminatory test performance. We first assessed the diagnostic accuracy by using "morphology" as reference standard and then by using the results of both "morphology" and "histology" evaluations. The following definition was used: to be considered positive at the morphology and histology test, the sample had to be positive at the morphology or at the histology examination; to be considered negative, the sample had to be negative at both morphology and histology evaluations. For PB samples, the results obtained by morphology and histology in the BM sample simultaneously taken from the same patient were used as a reference standard. For each of these analyses only pairs of samples for which complete evaluation was available (i.e., test and reference standard results) were considered.
Finally, to evaluate the relationship between the test results at diagnosis and at the time of PBSC harvesting with the patient outcome, we drew survival curves separately for different stages of disease (stage 1, 2, or 3 versus stage 4, i.e., localized versus metastatic disease), using (a) life status (dead/alive) as an event of interest; (b) time since diagnosis (in years) as a time variable; and (c) test results (positive/negative), obtained with each technique, as an independent indicator. Survival curves were obtained with the Kaplan-Meier method and compared by log-rank statistics. A P value <0.05 was considered as statistically significant. We did statistical analyses using the Statistica (release 6.0, StatSoft Inc., Tulsa, OK) and the Stata (release 7.0, Stata Corporation, College Station, TX).
| RESULTS |
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Sensitivity was evaluated in spiking experiments by mixing logarithmic dilutions of the IRM-32 NB cell line with 1 x 107 PB mononuclear cells from healthy donors. A sensitivity of 1 NB cell of 106 total cells was detected for GD2 IC (Fig. 1A)
and PGP RT-PCR (Fig. 1B)
, whereas the sensitivity for TH RT-PCR was 1 NB cell of 105 total cells (Fig. 1B)
. The sensitivity of morphological and histologic analyses is approximately 1 NB cell of 103 to 104 total cells (17)
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With respect to IC and RT-PCR results, the not assessable evaluations accounted for 5.9 and 6.7% in BM samples and for 2 and 14.1% in PB samples, respectively.
Relationship between Test Results and Sample Types.
The distribution of positive results obtained with the different techniques at the various time points during disease course is shown in Fig. 2
. Figure 2A
reports data obtained with standard morphology and histology (closed and open bars, respectively). Figure 2B
reports data obtained by IC in BM and PB samples. In BM samples, the percentages of IC-positive results (Fig. 2B
, open bars) were high at all time points tested, and the pattern of positivity was similar to that obtained by histology (Fig. 2A
, open bars).
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Percentages of positivity for TH and PGP RT-PCR evaluations (Fig. 2C and D
, respectively) were consistently elevated, both in PB and in BM (closed and open bars, respectively), in the absence of any correlation with morphology and/or histology.
At diagnosis, the percentage of positive results obtained by IC in PB and BM samples was significantly higher in children
12 months (51.3 and 63%, respectively) as compared with those <12 months of age (12.2 and 36.1%, P < 0.001. Likewise, in BM samples, positivity by morphology was significantly higher in children
12 months (52.9 versus 20.9%; P < 0.001). Moreover, the percentage of positive results by IC in PB samples (64.1 versus 7.3%, P < 0.001) and in BM (88.6 versus 18.5%; P < 0.001), was significantly higher in patients with stage 4 than in patients with stage 1, 2, or 3 disease.
When comparing the two classes of age group or localized versus metastatic disease, no statistically significant difference was observed in terms of percentage of positive results with PGP and TH techniques, either in PB or BM samples.
With respect to PBSC testing, all of the samples from patients <12 months and/or staged 1, 2, or 3 at diagnosis were negative by IC (Table 3)
. Only 7.6% of PBSC samples tested positive by IC; all were from patients
12 months and/or stage 4 at diagnosis (Table 3)
. On the contrary, TH and/or PGP RT-PCR were positive in
50% of stage 4 patients at diagnosis and/or
12 months of age.
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Diagnostic Accuracy of the Different Techniques.
Table 4
summarizes the total number of pairs of evaluations available for the specificity, sensitivity, and diagnostic accuracy analysis of IC, TH, and PGP evaluations, done in BM and PB samples overall and in samples collected at NB diagnosis.
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The sensitivity and specificity of TH in BM samples were 0.89 and 0.67, respectively, resulting in a DOR of 16 (Table 4)
. In PB specimens, the sensitivity of TH was the highest, but the specificity was low, resulting in a DOR of 6 (Table 3)
. PGP accuracy was quite low, both in BM and PB samples, as a result of low sensitivity and specificity in all types of samples (Table 4)
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Taking the results of both morphology and histology evaluations as reference standard, the IC technique was confirmed as the one with the highest DORMH (10.65 in BM and 9.2 in PB samples) and the PGP technique as the one with the lowest (Table 4)
. A general trend to a decrease in the DORMH values as compared with DOR was observed for all techniques (Table 4)
. This trend was especially evident for TH.
When only the results obtained at diagnosis were considered, the DOR and the DORMH of IC greatly increased, whereas the TH DORMH was essentially unchanged compared with DORHM calculated using the results of all samples (Table 4)
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Survival by International Neuroblastoma Staging System Stage and IC Test Results.
Figure 3
reports the survival analysis of NB patients with localized disease (Fig. 3A)
and metastatic disease (Fig. 3B)
stratified by results obtained by IC in PB at diagnosis. The survival of the few (n = 4) children with localized disease that tested positive at IC in PB samples was significantly different from the overall survival of the 51 patients that were negative by IC (log-rank test, P < 0.0001; Fig. 3A
). Similar results were obtained when children with localized disease and positive IC in BM at diagnosis were compared with patients with negative IC (log-rank test P = 0.013).
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Survival analysis was done for the stage 4 patients receiving MAT, which were tested by IC (n = 50) and RT-PCRs (n = 33) at the time of PBSC harvesting. For any techniques, children who tested positive had similar probability of survival of those who were negative (log-rank test; P = 0.59 for TH, P = 0.66 for IC, and P = 0.97 for PGP).
| DISCUSSION |
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The currently used techniques for neuroblastoma cell detection are specific but of limited sensitivity; thus, novel and more sensitive assays based on IC or RT-PCR have been developed. Although the results published thus far seem promising, no direct, blind comparison among morphological examination, RT-PCR, and IC has been reported.
In this study GD2 IC, TH, and PGP RT-PCRs displayed similar analytical sensitivity/specificity in simulated samples and in spiking experiments but often yielded conflicting results in relation to the type of sample, the time of sampling, and the clinical features of the patients. Discrepancies between TH and PGP results, as well as between IC and RT-PCRs, are in accordance with the heterogeneous results reported in previous studies on NB cell detection that used different methods (7 , 19) or different molecular markers (19, 20, 21) . It is noteworthy that the results of BM morphology and histology differed in about 60% of the BM samples tested, in accordance to the report of Aronica et al. (17) .
In our study, regardless of the reference standard used and the categories of patients considered, IC showed a better DOR as compared with RT-PCRs, with both BM and PB samples. We thus believe that because of its excellent specificity, IC may become a useful adjunct to morphological and histologic analyses of BM samples.
The lower DOR of RT-PCR assays versus IC was related to the higher percentage of positive results in PB and PBSC samples from all categories of patients, as well as in BM samples from stage 4 patients during therapy. However, whereas the DOR of PGP RT-PCR was very low, indicating that this assay cannot be recommended for additional studies, the DOR of TH RT-PCR was satisfactory. This finding supports the need for further multicentric prospective studies to establish its clinical usefulness, especially because no other factors have been found to predict relapse in stage 4 patients (ref. 22 , this report).
False positivity of TH RT-PCR may not be a likely event because (a) the illegitimate transcription of this gene has not been shown in this and previous (5, 6, 7 , 10 , 13 , 23, 24, 25) studies; (b) in a previous report from some of us (26) , several PBSC samples that tested negative by IC turned positive after anti-GD2 immunomagnetic enrichment, indicating the presence of very few tumor cells; and (c) all of the PBSC samples positive by TH RT-PCR were from patients whose BM tested positive 3 to 4 weeks earlier.
A second, but no less important, aim of our study was to evaluate the relationship between the results obtained using different techniques with the patient clinical features and outcomes. The main conclusion was that IC positivity at diagnosis, both in PB and BM samples, significantly correlated with adverse outcome in patients with localized disease, (i.e., stage 1, 2, or 3 according to International Neuroblastoma Staging System criteria; ref. 2 ). This finding, however, should be taken with caution because it is based on very few patients, and larger prospective studies are needed to confirm this observation.
Our results, however, support the hypothesis that IC may represent a helpful approach to stratify NB patients with localized disease into different risk categories. Thus far only MYC-N amplification has been shown to predict a poor outcome in these patients (27) . It is noteworthy that only 1 of 4 and 2 of 16 patients with localized disease, who tested positive by IC in the PB and in BM samples, respectively, showed MYC-N amplification in the primary tumor.
In NB patients with localized disease, TH RT-PCR gave positive results more frequently than IC with both BM and PB samples, but these results did not correlate with patient survival. Thus, the relevance of this observation remains to be addressed in future prospective studies.
Another important finding is that the results obtained with PBSC samples by IC or TH RT-PCR, two techniques with different DOR, did not correlate to patient survival. This lack of correlation has never been reported before for neuroblastoma patients and challenges the tenet that reinfusion of contaminated PBSC increases the likelihood of relapse. In addition, the present results raise doubts about the superiority of selected CD34 cells over unselected PBSC in reducing relapse risk (9 , 28) and about the postulated antitumor effect of contaminated PBSC in neuroblastoma patients (29) .
The final conclusions of this study are that IC may have a role in prognostic evaluation of patients with localized NB and that TH RT-PCR holds promise for identification of stage 4 patients at risk of relapse. These indications, however, must be confirmed by large multicenter studies carried out using standardized procedures and strict quality control.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Note: M. Corrias, L. Faulkner, and A. Pistorio contributed equally to this report. V. Pistoia and A. Garaventa contributed equally as last author.
Requests for reprints: Maria Valeria Corrias, Laboratorio Oncologia, Istituto G. Gaslini, L.go Gaslini, 5, 16148 Genova, Italy. Phone: 39-010-5636-342; Fax: 39-010-3779820; E-mail: mariavaleriacorrias{at}ospedale-gaslini.ge.it
Received 4/26/04; revised 8/ 5/04; accepted 8/20/04.
| REFERENCES |
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