
Clinical Cancer Research Vol. 10, 8493-8500, December 15, 2004
© 2004 American Association for Cancer Research
Molecular Oncology, Markers, Clinical Correlates |
Association of Epigenetic Inactivation of RASSF1A with Poor Outcome in Human Neuroblastoma
Qiwei Yang1,
Peter Zage2,
David Kagan1,
Yufeng Tian1,
Roopa Seshadri2,
Helen R. Salwen1,
Shuqing Liu1,
Alexandre Chlenski1 and
Susan L. Cohn2
1 The Robert H. Lurie Comprehensive Cancer Center and 2 Department of Pediatrics, Northwestern University, Feinberg School of Medicine, Chicago, Illinois
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ABSTRACT
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Purpose: To investigate the prevalence and potential clinical significance of epigenetic aberrations in neuroblastoma (NB).
Experimental Design: The methylation status of 11 genes that are frequently epigenetically inactivated in adult cancers was assayed in 13 NB cell lines. The prevalence of RASSF1A and TSP-1 methylation was also analyzed in 56 NBs and 5 ganglioneuromas by methylation-specific PCR. Associations between the methylation status of RASSF1A and TSP-1 and patient age, tumor stage, tumor MYCN status, and patient survival were evaluated.
Results: Epigenetic changes were detected in all 13 NB cell lines, although the pattern of gene methylation varied. The putative tumor suppressor gene RASSF1A was methylated in all 13 cell lines, and TSP-1 and CASP8 were methylated in 11 of 13 cell lines. Epigenetic changes of DAPK and FAS were detected in only small numbers of cell lines, whereas none of the cell lines had methylation of p16, p21, p73, RAR-ß2, SPARC, or TIMP-3. RASSF1A was also methylated in 70% of the primary NB tumors tested, and TSP-1 methylation was detected in 55% of the tumors. RASSF1A methylation was significantly associated with age >1 year (P < 0.01), high-risk disease (P < 0.016), and poor survival (P < 0.001). In contrast, no association between TSP-1 methylation and prognostic factors or survival was observed.
Conclusions: Our results suggest that epigenetic inactivation of RASSF1A may contribute to the clinically aggressive phenotype of high-risk NB.
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INTRODUCTION
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Neuroblastoma (NB), a childhood neoplasm arising from neural crest cells, is characterized by a diversity of clinical behaviors ranging from spontaneous remission to rapid tumor progression and death (1)
. Over the past decade, transformation-linked genetic changes have been identified that have contributed to the understanding of the predisposition, metastasis, treatment responsiveness, and prognosis of a variety of cancers (2, 3, 4, 5, 6)
. More recent studies have indicated that epigenetic aberrations may also contribute to NB pathogenesis (7, 8, 9, 10, 11)
. In many types of adult cancer, methylation of genes known to play important roles in tumor suppression, cell cycle regulation, apoptosis, DNA repair, and metastatic potential is observed at high frequency (12
, 13)
. Although much less is known about the prevalence of gene methylation in pediatric cancers, the RASSFIA locus at 3p21.3 has been shown to be silenced at high frequency in pediatric solid tumors (11
, 14)
. In contrast, only small subsets of pediatric tumors have epigenetic changes of other genes that are commonly methylated in adult cancers including p16INK4A, MGMT, GSTP1, APC, DAPK, RAR-ß, CDH1, and CDH3 (14)
, suggesting that methylation profiles of pediatric and adult cancers differ.
Ectopic expression of RASSF1A potently inhibits tumorigenicity of human cancer cell lines, strongly suggesting that RASSF1A is a tumor suppressor gene (15, 16, 17)
. RASSF1A protein contains a Ras association domain like that of Ras effectors and is predicted to exert its function through a Ras signal transduction pathway (18)
. Recently, RASSF1A has been shown to induce growth arrest by inhibiting the accumulation of native cyclin D1 and preventing cells from passing through the retinoblastoma family cell cycle restriction point and entering S phase (19)
. RASSF1A also regulates the stability of mitotic cyclins and the timing of mitotic progression by interacting with Cdc20 and inhibiting the activity of the anaphase-promoting complex (17)
. Depletion of RASSF1A by RNA interference results in accelerated mitotic cyclin degradation, mitotic progression, and cell division defects characterized by centrosome abnormalities and multipolar spindles (17)
, indicating that RASSF1A also plays a role in chromosome stability.
In this study, we examined the methylation status of 11 genes known to be aberrantly hypermethylated in adult cancers, in 13 genetically heterogeneous NB cell lines with disparate growth characteristics. Similar to previous studies (14)
, we found that RASSF1A was epigenetically inactivated in all of the NB cell lines tested. Six genes (RAR-ß2, p21, p16, p73, SPARC, and TIMP-3) were not methylated in any of the cell lines, whereas DAPK, TSP-1, FAS, and CASP8 were methylated in a subset of cell lines. In primary NB and ganglioneuroma tumor samples, RASSF1A methylation was significantly associated with high-risk disease and poor outcome. Our results suggest that epigenetic inactivation of this tumor suppressor gene may enhance the malignant potential of NB tumors.
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MATERIALS AND METHODS
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Cells and Culture Conditions.
The biological and genetic characteristics of the NB cell lines used in this study have been previously described (20, 21, 22, 23, 24, 25, 26)
. NB cell lines were grown at 5% CO2 in RPMI 1640 (Invitrogen, Carlsbad, CA) supplemented with 10% heat-inactivated fetal bovine serum, L-glutamine, and antibiotics.
Patients and Tumor Specimens.
Sixty-one primary NB tumors or ganglioneuromas were obtained from Childrens Memorial Hospital at time of diagnosis, before the administration of chemotherapy. Medical records were reviewed to obtain information regarding tumor stage, age of the patient, sex, MYCN gene status, and outcome. This study was approved by the Childrens Memorial Medical Center Institutional Review Board.
DNA Isolation and Bisulfite Modification.
Total genomic DNA was extracted from NB cell lines and primary tumors with the Genomic-tip and DNeasy tissue kit (Qiagen, Valencia, CA) and modified by sodium bisulfite with the CpGenome DNA Modification Kit (Intergen Co., Purchase, NY). Genomic DNA from human normal adrenal and brain tissues were purchased from BioChain Institute, Inc. (Hayward, CA). As previously described (7)
, 1 µg of genomic DNA was denatured by NaOH and modified by sodium bisulfite, which converts all of the unmethylated cytosines to uracils, whereas methylated cytosines remain unchanged. The modified DNA was desulfonated with NaOH and purified.
Methylation Analysis.
Bisulfite-modified DNA was amplified as previously described (7)
with primers specific for methylated and unmethylated sequences of 11 gene promoter regions. For methylation-specific PCR analysis of P21, PCR was done with methylation-specific primers (5'-GATAATAGGGGATTTCGGGTCGGCG-3' and 5'-GTAGATAATAGGGGATTTTGGGTTGGTG-3') and unmethylation-specific primers (5'-GACCCACGCCCGTCATTCACCTACCG-3' and 5'-CCAACCCACACCCATCATTCACCTACCA-3') with 200 ng of the bisulfite-modified genomic DNA as template for 35 cycles at 95°C for 30 seconds, 56°C for 45 seconds, and 72°C for 45 seconds. For methylation-specific PCR analysis of the other 10 genes (Fig. 1)
, the PCR assays were done with conditions described previously (7
, 9
, 27, 28, 29, 30)
. The PCR products were separated by electrophoresis on a 2.5% agarose gel and visualized under UV illumination with ethidium bromide staining. Universal Methylated DNA (Intergen), which is enzymatically methylated human genomic DNA, was used as a positive control. For bisulfite DNA sequencing, DNA sequences were amplified with primers 5'-GTTTTGGTAGTTTAATGAGTTTAGGTTTTTT-3' and 5'-ACCCTCTTCCTCTAACACAATAAAACTAACC-3' in 25 µL of reaction buffer containing 200 µmol/L of each deoxynucleotide triphosphate and Hot-Start Taq polymerase (Qiagen) and incubated at 95°C for 30 seconds, 54° C for 45 seconds, and 72°C for 45 seconds for 30 cycles. A seminested PCR was done with 1 µL of 25 µL of the initially amplified products and primers 5'-CCCCACAATCCCTACACCCAAAT-3' and 5'-GTTTTGGTAGTTTAATGAGTTTAGGTTTTTT-3' with PCR conditions of 95°C for 30 seconds, 56°C for 45 seconds, and 74°C for 1 minute for 30 cycles. PCR products (204 bp) were gel-purified and cloned into the pCR2.1-TOPO vector (Invitrogen) according to the manufacturers protocol. Plasmid DNA was purified with the QIAprep Spin Miniprep Kit (Qiagen). Four clones for each cell line or tumor samples were then sequenced with the ABI PRISM 377 DNA sequencer (Applied Biosystems, Foster City, CA).

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Fig. 1. Summary of the methylation patterns of 11 genes in 13 NB cell lines. Red indicates genes with methylation, and green indicates genes with unmethylation.
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Expression of RASSF1 in Neuroblastoma Cell Lines.
Total RNA was isolated from NB cell lines with TRIzol reagent (Invitrogen) and was cleaned with RNeasy mini columns (Qiagen) according to the manufacturers protocol. The cDNA synthesis was done with the SuperScript Double Stranded cDNA Synthesis Kit (Invitrogen). Total RNA (2.0 µg) was reverse-transcribed in a final volume of 20 µL, and 1 µL of the diluted reaction mixture was subsequently amplified by PCR. Isoform-specific reverse transcription (RT)-PCR assays were used for analysis of RASSF1A, RASSF1C, and RASSF1F expression as described previously (15)
. RT-PCR of ß2-microglobulin transcripts was done as described previously (7)
. In some experiments, 5-Aza-dC (Sigma, St. Louis, MO) was added to cells at a final concentration of 1 µmol/L, and cells were then harvested after 4 days of treatment.
Statistical Analysis.
Data were summarized with frequencies, and
2 or Fishers exact tests were used to compare proportions between study groups. The Kaplan-Meier method was used to estimate survival probabilities, and survival functions were compared with the log-rank test. Cox proportional hazards regression was used to determine the association of the various predictors with the outcome of survival. The proportional hazards assumption was verified with interaction effects of the covariates with time. The sample size of this cohort limited the maximum number of predictors in a model to two. Hence, the best two-predictor model was determined from the set of all of the candidate covariates. Likelihood ratio tests were used to compare candidate models. Correction for multiple comparisons was made when testing the associations of the genes (RASSF1A and TSP-1) with outcome. Hazard ratios and corresponding 95% confidence interval (CI) are presented. All of the conclusions were made at 0.05 level of significance.
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RESULTS
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Profile of Promoter Hypermethylation in Neuroblastoma Cell Lines.
Methylation-specific PCR was used to examine the promoter hypermethylation profile of 11 genes in 13 biologically heterogeneous NB cell lines. Each of the genes selected for these studies has previously been shown to be methylated at a high frequency in adult cancers (13
, 15
, 31
, 32)
. The NB cell lines used in these studies have been well characterized (20
, 24, 25, 26)
, and their biological features are summarized in Table 1
. Cells differentiating along neuronal (N-type) and Schwannian-glial (S-type) lineages are commonly present in NB cell lines, and 6 of the cell lines analyzed in this study were N- or S-type subclones (22
, 33)
. All but 2 of the cell lines are capable of anchorage-independent growth and readily formed tumors in nude mice. Nine of the cell lines are MYCN-amplified, and all of the cell lines have 1p loss, 11q loss, and/or 17q gain. In addition, epigenetic changes were detected in all 13 NB cell lines (Fig. 1)
.
Of the 11 genes analyzed by methylation-specific PCR, only the tumor suppressor gene RASSF1A was methylated in all 13 NB cell lines (Fig. 1
; Fig. 2A
). Four genes (TSP-1, DAPK, Fas, and Casp8) were methylated in a subset of the cell lines. For the other 6 genes (SPARC, TIMP-3, p73, P16, P21, and RAR-ß2), promoter methylation was not detected in any of the cell lines. The methylation status of RASSF1A in 6 NB cell lines was also analyzed by bisulfite sequencing, and as shown in Fig. 3
, almost all of the 16 CpG sites were methylated. In contrast, the RASSF1A promoter remained unmethylated in HeLa cells, consistent with the methylation-specific PCR results (Fig. 2A
; Fig. 3
).

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Fig. 2. Methylation-specific PCR assay. A, methylation status of the RASSF1A gene in NB cell lines. Universal methylated DNA serves as positive control for methylated DNA. RASSF1A is unmethylated in HeLa cells. B, methylation status of the RASSF1A gene in primary NB tumors. The RASSF1A promoter is unmethylated in normal human adrenal and brain tissues. indicates ganglioneuromas.
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Fig. 3. Bisulfite sequencing analysis of the methylation status of RASSF1A in NB cell lines and primary tumors. Six NB cell lines, HeLa cells, and 18 NB primary tumors were examined. Black, 100% methylation; red, 75% methylation; green, 50% methylation; yellow, 25% methylation; and white, unmethylation.
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Analysis of RASSF1 Expression in Neuroblastoma Cell Lines.
We have previously shown that TSP-1 is silenced in NB cells because of the methylation of the TSP-1 promoter (7)
. To confirm that methylation of RASSF1A was also associated with gene silencing, we examined RASSF1 gene expression in 10 NB cell lines. RASSF1A is one of the 4 alternatively spliced mRNAs transcribed by RASSF1 (15
, 31)
. To analyze the pattern of expression of major RASSF1 transcripts, isoform-specific RT-PCR was used. As shown in Fig. 4A
, neither RASSF1A nor RASSF1F transcripts were detected in any of the 10 NB cell lines examined. However, all of the 10 NB cell lines expressed RASSF1C mRNA.

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Fig. 4. Expression of RASSF1A mRNA in NB cell lines. A. Expression of RASSF1A, RASSF1F, and RASSF1C mRNA was detected by isoform-specific RT-PCR in 10 NB cell lines. B. Restoration of RASSF1A expression was analyzed by RT-PCR after treatment with 5-Aza-dC in vitro.
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Restoration of RASSF1A Expression.
Epigenetic gene silencing is generally reversible with agents that inhibit DNA methyltransferase like 5-aza-2'-deoxycytidine (5-Aza-dC). We have previously shown that TSP-1 expression can be restored in the NMB, IMR-5, and NBL-W-N NB cells lines following treatment with 5-Aza-dC (7)
. To test if 5-Aza-dC would also restore RASSF1A expression in these cell lines, RASSF1A mRNA levels were examined by RT-PCR after 4 days of treatment. As shown in Fig. 4B
, RASSF1A and RASSF1F expression was restored after treatment with the demethylating agent. The coregulation of the two isoforms by methylation was expected because both RNAs are transcribed from the same promoter (15)
.
Methylation of RASSF1A in Primary Neuroblastoma Tumors.
To investigate the prevalence and potential clinical significance of RASSF1A methylation, methylation-specific PCR was done with 56 NB tumors and 5 ganglioneuromas samples (Fig. 2B)
. Methylation of the RASSF1A gene was detected in 39 of the 56 (70%) tumors. Interestingly, RASSF1A methylation was not observed in any of the 5 benign ganglioneuromas. We confirmed the methylation status of RASSF1A by bisulfite DNA sequencing analysis in 18 NB and ganglioneuroma tumor samples (Fig. 3)
. Consistent with the methylation-specific PCR results, in the ganglioneuroma samples, the 16 CpG sites examined were almost completely unmethylated. Furthermore, the methylation density of the CpG sites was less in the local-regional tumors (stages 1, 2, and 3) than the widely disseminated stage 4 tumors (38.8% versus 72.2%). Of the 6 local-regional tumors analyzed, two were almost completely unmethylated and the other four were partially unmethylated. In contrast, RASSF1A methylation was detected in 8 of the 10 stage 4 tumors.
Medical records of the 61 patients from whom tumor samples were obtained were reviewed to determine whether aberrant hypermethylation of RASSF1A was statistically associated with prognostic features other than tumor histology. The clinical and biological features of the patients with NBs and ganglioneuromas are summarized in Table 2
. The estimated 10-year survival rate for the cohort was 61% with a median follow-up of 102 months (range from 1 month to 193 months; Fig. 5A
). As expected, stage was prognostic of outcome, and patients with stage 4 disease had worse outcome than those with local-regional disease or stage 4S NB (estimated 10-year survival was 29% versus 89%, respectively, P < 0.0001). In addition to stage, age at diagnosis and MYCN amplification are well-established prognostic factors in NB and are used for risk-group stratification (1)
. In this study, we stratified the patients into 2 risk-groups: high-risk and nonhigh-risk. Nonhigh-risk patients included those with stages 1 and 2 disease, infants with stages 4 and 4S tumors, and patients with stage 3 tumors that lacked MYCN amplification. Similar to the criteria used by the Childrens Oncology Group, patients with stage 3 MYCN-amplified tumors and children older than 1 year of age with stage 4 disease were considered high-risk (1)
. The estimated 5- and 10-year overall survival rates for patients with nonhigh-risk disease were 86% (95% CI, 7497%) and 86% (95% CI, 7497%), respectively (Fig. 5B)
. Poor outcome was observed in our high-risk cohort, with estimated 5- and 10-year survival rates of 40% (95% CI, 1862%) and 23% (95% CI, 442%).

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Fig. 5. Kaplan-Meier survival curves for NB patients. A, overall survival of 56 NB patients. B, overall survival according to risk-group. Nonhigh-risk patients include those with stages 1 and 2 disease, infants with stages 4 and 4S tumors, and patients with stage 3 tumors that lacked MYCN amplification. High-risk patients include those with stage 3 MYCN-amplified tumors and children older than 1 year of age with stage 4 disease were classified as high-risk. C, overall survival according to the methylation status of RASSF1A. D, overall survival according to the methylation status of TSP-1.
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RASSF1A Methylation Is Associated with High-risk Neuroblastoma and Poor Outcome.
RASSF1A methylation was statistically significantly associated with age
1 year (P = 0.01; Table 3
). Trends associating RASSF1A methylation with the unfavorable features MYCN amplification (P = 0.11) and stage 4 (P = 0.14) were also seen but did not reach statistical significance. However, a significant association between RASSF1A methylation and high-risk disease was observed (P = 0.016). Univariate analysis also showed that the methylation status of RASSF1A was an adverse prognostic feature, as patients with methylated RASSF1A had significantly worse survival than those with unmethylated RASSF1A methylation [estimated 10-year survival of 50% (CI, 3466%) versus 94% (CI, 82100%), respectively, P = 0.001; Fig. 5C
; Table 1
]. The sample size of this cohort limited the maximum number of predictors in a model to two, and stage (P < 0.001) and age (P = 0.02) were found to be the best two-predictor model. However, this model was found to be as good as the model with risk category (P < 0.001) alone.
TSP-1 Methylation in Neuroblastoma Is Not Associated with Outcome in Patients.
The methylation status of the angiogenesis inhibitor TSP-1 was also analyzed in this cohort of tumors. Promoter methylation was detected in 31 (55%) of the 56 NB patient samples and in 3 of the 5 ganglioneuromas. There was no association between RASSF1A and TSP-1 methylation (Table 3)
. In contrast to RASSF1A, TSP-1 methylation did not correlate with stage, MYCN amplification, or risk group (Table 2)
, and no association with survival was observed (Fig. 5D)
.
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DISCUSSION
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In this study, we examined the methylation status of 11 genes, frequently epigenetically inactivated in adult cancer, in 13 biologically heterogeneous NB cell lines. Of the 11 genes analyzed, only RASSF1A was methylated in all 13 cell lines. Additional expression studies confirmed that RASSF1A was epigenetically silenced in the NB cell lines and that expression could be restored after treatment with the demethylating agent 5-Aza-dC. Six genes (p16, p21, p73, RAR-ß2, TIMP-3, and SPARC) were not methylated in any of the cell lines, whereas the remaining four genes (CASP8, TSP-1, FAS, and DAPK) were methylated in subsets of NB cell lines. Although an association between CASP8 methylation and MYCN amplification was observed in previous studies (9, 10)
, we detected aberrantly methylated genes, including CASP8, in both MYCN amplified and nonamplified NB cell lines.
Epigenetic abnormalities were seen in NB cells that are capable of forming tumors in nude mice as well as nontumorigenic cell lines. However, the number of methylated genes was higher in the tumorigenic cell lines, suggesting that the malignant potential of NB cells may be enhanced in cells with multiple epigenetically inactivated genes. TSP-1 was the only gene that was unmethylated in the nontumorigenic cell lines and methylated in the 11 tumorigenic cell lines. To investigate if epigenetic inactivation of this angiogenesis inhibitor was also associated with clinically aggressive NB tumors, the methylation status of TSP-1 was examined in primary tumor samples. We detected TSP-1 methylation in subsets of both malignant NBs and benign ganglioneuromas, and no correlation between TSP-1 methylation and stage, age, tumor biology, or outcome was seen.
We also examined the status of RASSF1A methylation in the NB and ganglioneuroma tumor samples. Epigenetic changes of this gene were detected in 70% of the primary NB tumor samples, whereas none of the ganglioneuromas had methylated RASSF1A. In addition, significant associations between RASSF1A gene methylation and age
1 year and high-risk disease were seen. RASSF1A methylation also occurred more frequently in MYCN-amplified tumors, although this association did not reach statistical significance. In contrast to the TSP-1 studies, significantly worse survival was seen in the cohort of children with methylated RASSF1A compared with those with unmethylated RASSF1A. Recently, a similar association between RASSF1A gene methylation and poor outcome has been reported in patients with nonsmall-cell lung cancer (15)
, showing the epigenetic inactivation of this tumor suppressor gene may enhance the malignant phenotype of many types of cancer.
Harada et al. (14)
have also reported an association between RASSF1A methylation and age
1 year in patients with NB. However, in contrast to our results, survival was not impacted by epigenetic changes of RASSF1A in that series (14)
. The reasons for the discordant results are likely because of disparities in patient cohorts, as the percentage of infants and patients with high-risk features can dramatically impact outcome. Although our cohort was small, it seems to be representative, as the percentage of patients with local-regional disease versus disseminated disease and the survival rates of our high-risk and nonhigh-risk patients are similar to larger series (1
, 34, 35, 36, 37)
. Furthermore, because our patients have been followed for a prolonged period of time, with a median follow-up of >8 years, the survival curves are relatively stable. Survival rates of high-risk patients have been shown to decrease dramatically over time (38)
, and thus performing analyses in patients with short follow-ups are commonly misleading.
The strong association between RASSF1A methylation and high-risk NB supports a pathophysiologic link between epigenetic inactivation of RASSF1A and malignant phenotype. Although the mechanism by which RASSF1A may influence NB growth remains unknown, RASSF1A has recently been shown to regulate cell cycle regulation (19)
. In addition, cell division defects characterized by centrosome abnormalities and multipolar spindles have been observed with RASSF1A depletion (17)
. Additional functional studies are ongoing in our laboratory to investigate whether the cell cycle and mitotic progression of NB cells can be directly impacted by overexpression of RASSF1A. These experiments will hopefully enhance our understanding of the role epigenetic silencing of RASSF1A plays in the regulation of NB growth and may also lead to the development of new strategies for correcting the defects in cell cycle regulation induced by epigenetic inactivation of this gene.
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FOOTNOTES
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Grant support: NIH/National Institute of Neurological Disorders and Stroke Grant NS049814, the Neuroblastoma Childrens Cancer Society, Friends for Steven Pediatric Cancer Research Fund, the Elise Anderson Neuroblastoma Research Fund, the North Suburban Medical Research Junior Board, and the Robert H. Lurie Comprehensive Cancer Center, NIH, National Cancer Institute Core Grant 5P30CA60553.
The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Requests for reprints: Susan L. Cohn, Childrens Memorial Hospital, Division of Hematology/Oncology, 2300 Childrens Plaza, Chicago, IL 60614. Phone: (773) 880-4562; Fax: (773) 880-3053; E-mail: scohn{at}northwestern.edu
Received 7/ 6/04;
revised 9/10/04;
accepted 9/23/04.
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REFERENCES
|
|---|
- Brodeur GM, Maris JM. Neuroblastoma Pizzo PA Poplack DG. eds. . Principles and Practice of Pediatric Oncology 4th ed. 2001p. 895-937. Lippincott-Raven Philadelphia
- Look AT, Hayes FA, Shuster JJ, et al Clinical relevance of tumor cell ploidy and N-myc gene amplification in childhood neuroblastoma: a Pediatric Oncology Group study. J Clin Oncol 1991;9:581-91.[Abstract]
- Brodeur GM, Seeger RC, Schwab M, Varmus HE, Bishop JM. Amplification of N-myc in untreated human neuroblastomas correlates with advanced disease stage. Science (Wash DC) 1984;224:1121-4.[Abstract/Free Full Text]
- Seeger RC, Brodeur GM, Sather H, et al Association of multiple copies of the N-myc oncogene with rapid progression of neuroblastomas. N Engl J Med 1985;313:1111-6.[Abstract]
- Bown N, Cotterill S, Lastowska M, et al Gain of chromosome arm 17q and adverse outcome in patients with neuroblastoma. N Engl J Med 1999;340:1954-61.[Abstract/Free Full Text]
- Maris JM, Matthay KK. Molecular biology of neuroblastoma. J Clin Oncol 1999;17:2226-79.
- Yang QW, Liu S, Tian Y, et al Methylation-associated silencing of the thrombospondin-1 gene in human neuroblastoma. Cancer Res 2003;63:6299-310.[Abstract/Free Full Text]
- Yan P, Muhlethaler A, Bourloud KB, Beck MN, Gross N. Hypermethylation-mediated regulation of CD44 gene expression in human neuroblastoma. Genes Chromosomes Cancer 2003;36:129-38.[CrossRef][Medline]
- Teitz T, Wei T, Valentine MB, et al Caspase 8 is deleted or silenced preferentially in childhood neuroblastomas with amplification of MYCN. Nat Med 2000;6:529-35.[CrossRef][Medline]
- van Noesel MM, van Bezouw S, Voute PA, et al Clustering of hypermethylated genes in neuroblastoma. Genes Chromosomes Cancer 2003;38:226-33.[CrossRef][Medline]
- Astuti D, Agathanggelou A, Honorio S, et al RASSF1A promoter region CpG island hypermethylation in phaeochromocytomas and neuroblastoma tumours. Oncogene 2001;20:7573-7.[CrossRef][Medline]
- Jones PA, Baylin SB. The fundamental role of epigenetic events in cancer. Nat Rev Genet 2002;3:415-28.[Medline]
- Esteller M, Corn PG, Baylin SB, Herman JG. A gene hypermethylation profile of human cancer. Cancer Res 2001;61:3225-9.[Abstract/Free Full Text]
- Harada K, Toyooka S, Maitra A, et al Aberrant promoter methylation and silencing of the RASSF1A gene in pediatric tumors and cell lines. Oncogene 2002;21:4345-9.[CrossRef][Medline]
- Burbee DG, Forgacs E, Zochbauer-Muller S, et al Epigenetic inactivation of RASSF1A in lung and breast cancers and malignant phenotype suppression. J Natl Cancer Inst (Bethesda) 2001;93:691-9.[Abstract/Free Full Text]
- Dreijerink K, Braga E, Kuzmin I, et al The candidate tumor suppressor gene, RASSF1A, from human chromosome 3p21.3 is involved in kidney tumorigenesis. Proc Natl Acad Sci USA 2001;98:7504-9.[Abstract/Free Full Text]
- Song MS, Song SJ, Ayad NG, et al The tumour suppressor RASSF1A regulates mitosis by inhibiting the APC-Cdc20 complex. Nat Cell Biol 2004;6:129-37.[CrossRef][Medline]
- Ortiz-Vega S, Khokhlatchev A, Nedwidek M, et al The putative tumor suppressor RASSF1A homodimerizes and heterodimerizes with the Ras-GTP binding protein Nore1. Oncogene 2002;21:1381-90.[CrossRef][Medline]
- Shivakumar L, Minna J, Sakamaki T, Pestell R, White MA. The RASSF1A tumor suppressor blocks cell cycle progression and inhibits cyclin D1 accumulation. Mol Cell Biol 2002;22:4309-18.[Abstract/Free Full Text]
- Foley J, Cohn SL, Salwen HR, et al Differential expression of N-myc in phenotypically distinct subclones of a human neuroblastoma cell line. Cancer Res 1991;51:6338-45.
- Cohn SL, Salwen H, Quasney MW, et al Prolonged N-myc protein half-life in a neuroblastoma cell line lacking N-myc amplification. Oncogene 1990;5:1821-7.[Medline]
- Ciccarone V, Spengler BA, Meyers MB, Biedler JL, Ross RA. Phenotypic diversification in human neuroblastoma cells: expression of distinct neural crest lineages. Cancer Res 1989;49:219-25.[Abstract/Free Full Text]
- Schwab M, Amler LC. Amplification of cellular oncogenes: a predictor of clinical outcome in human cancer. Genes Chromosomes Cancer 1990;1:181-93.[Medline]
- Van Roy N, Jauch A, Van Gele M, et al Comparative genomic hybridization analysis of human neuroblastomas: detection of distal 1p deletions and further molecular genetic characterization of neuroblastoma cell lines. Cancer Genet Cytogenet 1997;97:135-42.[CrossRef][Medline]
- Van Roy N, Van Limbergen H, Vandesompele J, et al Combined M-FISH and CGH analysis allows comprehensive description of genetic alterations in neuroblastoma cell lines. Genes Chromosomes Cancer 2001;32:126-35.[CrossRef][Medline]
- Savelyeva L, Corvi R, Schwab M. Translocation involving 1p and 17q is a recurrent genetic alteration of human neuroblastoma cells. Am J Hum Genet 1994;55:334-40.[Medline]
- Kang GH, Shim YH, Jung HY, et al CpG island methylation in premalignant stages of gastric carcinoma. Cancer Res 2001;61:2847-51.[Abstract/Free Full Text]
- Corn PG, Kuerbitz SJ, van Noesel MM, et al Transcriptional silencing of the p73 gene in acute lymphoblastic leukemia and Burkitts lymphoma is associated with 5' CpG island methylation. Cancer Res 1999;59:3352-6.[Abstract/Free Full Text]
- Schagdarsurengin U, Wilkens L, Steinemann D, et al Frequent epigenetic inactivation of the RASSF1A gene in hepatocellular carcinoma. Oncogene 2003;22:1866-71.[CrossRef][Medline]
- Petak I, Danam RP, Tillman DM, et al Hypermethylation of the gene promoter and enhancer region can regulate Fas expression and sensitivity in colon carcinoma. Cell Death Differ 2003;10:211-7.[CrossRef][Medline]
- Dammann R, Li C, Yoon JH, et al Epigenetic inactivation of a RAS association domain family protein from the lung tumour suppressor locus 3p21.3. Nat Genet 2000;25:315-9.[CrossRef][Medline]
- Bachman KE, Herman JG, Corn PG, et al Methylation-associated silencing of the tissue inhibitor of metalloproteinase-3 gene suggest a suppressor role in kidney, brain, and other human cancers. Cancer Res 1999;59:798-802.[Abstract/Free Full Text]
- Biedler JL, Helson L, Spengler BA. Morphology and growth, tumorigenicity, and cytogenetics of human neuroblastoma cells in continuous culture. Cancer Res 1973;33:2643-52.[Abstract/Free Full Text]
- Alvarado CS, London WB, Look AT, et al Natural history and biology of stage A neuroblastoma: A Pediatric Oncology Group Study. J Pediatr Hematol Oncol 2000;22:197-205.[CrossRef][Medline]
- Matthay KK, Perez C, Seeger RC, et al Successful treatment of Stage III neuroblastoma based on prospective biologic staging: A Childrens Cancer Group Study. J Clin Oncol 1998;16:1256-64.[Abstract/Free Full Text]
- Bowman LC, Castleberry RP, Cantor A, et al Genetic staging of unresectable or metastatic neuroblastoma in infants: A Pediatric Oncology Group Study. J Natl Cancer Inst (Bethesda) 1997;89:373-80.[Abstract/Free Full Text]
- Matthay KK, Villablanca JG, Seeger RC, et al Treatment of high-risk neuroblastoma with intensive chemotherapy, radiotherapy, autologous bone marrow transplantation, and 13-cis-retinoic acid. N Engl J Med 1999;341:1165-73.[Abstract/Free Full Text]
- Philip T, Zucker JM, Bernard JL, et al Improved survival at 2 and 5 years in the LMCE1 unselected group of 72 children with stage IV neuroblastoma older than 1 year of age at diagnosis: is cure possible in a small subgroup?. J Clin Oncol 1991;9:1037-44.[Abstract]
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