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Cancer Prevention |
Authors' Affiliations: 1 Department of Internal Medicine, Division of Oncology; Departments of 2 Internal Medicine and 3 Radiooncology, 4 Clinical Institute of Medical and Laboratory Diagnostics, Medical University of Graz, Graz; and 5 Department of Internal Medicine, Medical University Salzburg, Salzburg, Austria
Requests for reprints: Uwe Langsenlehner, Department of Internal Medicine, Division of Oncology, Medical University of Graz, Auenbruggerplatz 15, 8036 Graz, Austria. Phone: 43-316-385-3115; Fax: 43-316-385-3355; E-mail: uwe.langsenlehner{at}klinikum-graz.at.
| Abstract |
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The gene for COX-2, designated as PTGS2, carries a common T>C polymorphism at position 8473 in the 3'-untranslated region (8). The 8473-C variant has been associated with an increased risk for nonsmall cell lung cancer as well as colorectal cancer (8, 9). In contrast to these results, two other studies reported a protective effect of the same genetic polymorphism against lung cancer (10, 11). In the present study, we investigated the role of this PTGS2 8473T>C polymorphism for breast cancer.
| Materials and Methods |
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The study was done according to the Austrian Gene Technology Act and has been approved by the local ethical committee. Written informed consent was obtained from all participating subjects.
Genotypes were determined by a 5'-nuclease assay (TaqMan) with primers and probes designed and manufactured using Applera's "Assay-by-Design" custom service (Applied Biosystems, Vienna, Austria). PCR reaction and evaluation of fluorescence data were done as described previously (14). For each set of reactions, one negative control containing water instead of DNA was added to check for contamination. Finally, 95 samples were reanalyzed and results were identical for all samples.
Statistical analysis was done using SPSS 11.0 for Windows. Numerical values were analyzed by Student's t test, proportions of groups were compared by
2 test. Odds ratios and 95% confidence intervals were calculated by logistic regression to estimate the risk for breast cancer. Threshold for significance was P < 0.05.
| Results |
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2 test, P = 0.002). The homozygous CC genotype, but not the heterozygous TC genotype, was associated with breast cancer, suggesting a recessive effect of the C variant on breast cancer risk.
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The potential role of the PTGS2 8473T>C polymorphism for mRNA structure was analyzed using the Vienna RNA secondary structure server (16). The input sequence contained the polymorphic site and 250 bp of the 3' as well as the 5' flanking regions. The T>C exchange interrupted a predicted 25 bp stem, potentially altering mRNA stability and expression.
| Discussion |
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PTGS2 encodes the COX-2 enzyme, which has been recognized to have an important role for breast cancer development (3, 4). Our data are in line with the results of two previous studies, which found a similar association between the PTGS2 8473-CC genotype with nonsmall cell lung cancer (8) and colorectal cancer (9). Two other studies described a protective effect of the same genetic variant against lung cancer, which seems to be in clear contrast with our results (10, 11). The reason for this discrepancy is currently unclear, but may be due to the different etiologies of breast and lung cancer. Furthermore, the effects of PTGS2 gene polymorphisms on cancer risk are likely to be influenced by gene-environment interactions, such as smoking, which is the most important risk factor for lung cancer and strongly induces the expression of COX-2 (17). Unfortunately, in the present study, no data is available on environmental factors such as nonsteroidal anti-inflammatory drug use and diet that could potentially interact with PTGS2 genotype.
Another explanation for the discrepant associations between the PTGS2 8473T>C polymorphism and different types of cancer could be ethnic differences between studies. The PTGS2 8473T>C polymorphism could be in linkage disequilibrium with other causal genetic variants, and this linkage disequilibrium would likely differ across different ethnic populations.
Little is known about the functionality of the PTGS2 8473T>C polymorphism. The 3' untranslated region of the murine gene for COX-2 contains several regulatory elements altering mRNA stability and translational efficiency (18). This suggests that polymorphisms in the corresponding region of the human gene for COX-2 could similarly influence COX-2 expression. Nevertheless, analysis of the PTGS2 8473T>C polymorphism using the MatInspector Online Tool showed no creation or disruption of a potential transcription factor binding site. Analysis of the predicted mRNA secondary structure indicated that the 8473T>C exchange interrupts a 25 bp stem and creates an additional loop. This suggests a potential effect on the mRNA stability and expression, but the results of this in silico analysis remain to be proven by in vitro data. Finally, as has been stated above, the PTGS2 8473T>C polymorphism may be nonfunctional, but could be in linkage disequilibrium with a true causal variant.
Higher COX-2 activity has been associated with an increased tumor risk and poor prognosis, and inhibition of COX-2 reduces the incidence of a variety of cancers. We therefore hypothesize that expression of the PTGS2 8473-C allele, which was associated with an increased breast cancer risk in the present study, may be higher than that of the "wild-type" 8473-T allele. Further in vitro analyses of the genetic regulation of COX-2 expression will be necessary before a conclusion on the functionality of the PTGS2 8473T>C polymorphism can be drawn.
The PTGS2 8473T>C polymorphism was not associated with tumor size, histologic grade, presence of primary lymph node metastases, progesterone receptor positivity, or age at diagnosis. Interestingly, estrogen receptor positivity was less frequent among carriers of the CC genotype than among carriers of a T allele. This may be in line with data from Wulfing and coworkers, who reported an inverse relationship between COX-2 activity and estrogen receptor content of breast cancer tissue (19). Nevertheless, our analysis of the relation between PTGS2 genotype and estrogen receptor positivity was not based on an a priori hypothesis and should be regarded as hypothesis-generating rather than hypothesis-testing.
The present study included incident as well as prevalent cases, therefore, a survival bias cannot be excluded. Nevertheless, due to the rather modest effect and the low frequency of the CC risk-genotype, it is unlikely that the results of the present study have been strongly distorted due to survival bias.
One of the major problems of genetic association studies is the increasing risk of type 1 error (false positive) findings after multiple testing. The present study is the 11th investigation of genetic risk factor in the same study population. Applying statistical corrections for multiple testing (e.g., Bonferroni correction) can be used to reduce this type 1 error risk, but at the same time, increases type 2 error risk (false negative). Applying Bonferroni correction to the present study lowers the threshold for significance to 0.0045 (0.05/11), leaving our results still statistically significant.
The polymorphism we analyzed in the present study reflects only a part of the variability of the PTGS2 gene (20). In September 2005, the National Center for Biotechnology Information single nucleotide polymorphism database (http://www.ncbi.nlm.nih.gov) contained 32 common (heterozygosity >10%) human polymorphisms for the PTGS2 gene encoding COX-2. Further studies including other PTGS2 variants will very likely provide additional insight into the role of COX-2 genetics for breast cancer risk.
Recent studies have indicated that inhibition of COX-2 by nonsteroidal anti-inflammatory drugs may be useful in the prevention and treatment of breast cancer (57, 21). In view of the potential role of PTGS2 polymorphisms for COX-2 activity and cancer risk, it might be interesting to explore their role for the pharmacogenetics of COX-2 inhibitors in future studies.
| Footnotes |
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Received 9/21/05; revised 11/14/05; accepted 12/14/05.
| References |
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C) and the risk of lung cancer. Cancer Lett 2005;226:4954.[CrossRef][Medline]This article has been cited by other articles:
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