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Imaging, Diagnosis, Prognosis |
Authors' Affiliations: 1 Department of Medicine, Memorial University of Newfoundland, St. John's, Newfoundland, Canada; 2 Department of Pathology, University of Michigan Hospitals and Clinics, Ann Arbor, Michigan; 3 Division of Neuropathology, Washington University School of Medicine, St. Louis, Missouri; and 4 Department of Pathology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio
Requests for reprints: Hélène Paradis, Department of Medicine, Memorial University of Newfoundland, 300 Prince Philip Drive, St. John's, Newfoundland, Canada A1B 3V6. Phone: 709-777-8556; Fax: 709-777-8619; E-mail: hparadis{at}mun.ca.
| Abstract |
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Experimental Design: Tubedown protein expression was quantitatively assessed in neuroblastic tumors (neuroblastomas, ganglioneuroblastomas, and ganglioneuromas) and normal adrenal tissues using Western blot and OE5 immunohistochemistry. Regulation of Tubedown expression during retinoic acidinduced neuronal differentiation in neuroblastoma cell lines was assessed by Western blotting.
Results: High levels of Tubedown expression are observed in tumors with significant neuroblastic component, unfavorable histopathology, advanced stage, high-risk group, and poor outcome. In contrast, more differentiated subsets of neuroblastic tumors, ganglioneuroblastomas with favorable histopathology and ganglioneuromas, express low levels of Tubedown. In vitro, marked retinoic acidinduced neuronal differentiation responses of neuroblastoma cells are associated with a significant decrease in Tubedown expression, whereas limited neuronal differentiation responses to retinoic acid were associated with little or no decrease in Tubedown expression.
Conclusions: Our results indicate that the levels of Tubedown expression are linked to the differentiation status and aggressiveness of neuroblastic tumors and represent an independent prognostic factor for neuroblastoma. Tubedown expression may be useful to more accurately define different neuroblastic tumor subsets and ultimately provide more adequate assessment and treatment for neuroblastoma patients.
Neuroblastoma differentiation is likely an important biological process that can affect tumor outcome (8, 9). The use of differentiating agents is effective in improving the survival rate of high-risk neuroblastoma patients while limiting toxicity in normal host cells (1). One such commonly used differentiation agent is retinoic acid. Retinoic acid is one of the most powerful in vitro differentiating agents of neuroblastoma cells (10). The monitoring of neuroblastoma differentiation using specific differentiation markers could be useful in predicting neuroblastoma outcome.
Our laboratory isolated and characterized a developmentally regulated gene named TUBEDOWN (11). Tubedown-1 has been defined as a protein of 69 kDa with homology to yeast Nat1, a subunit of the yeast acetyltransferase NatA (11). A longer 100-kDa variant of Tubedown-1, Tubedown-100, seems to be derived from the same transcript (1214). Tubedown is transiently expressed during embryogenesis in several tissues, whereas in adults high levels are found in only a few tissues, including bone marrow, ocular endothelial cells, atrial endocardium, and blood vessels of regressing ovarian follicles (11, 15). TUBEDOWN transcript is also expressed in neuronal cells during brain development but suppressed during neuronal maturation (14). TUBEDOWN is also highly expressed in papillary thyroid carcinoma cells, whereas adult tissues except testis express low levels (12, 16). We have extensively characterized Tubedown as a negative regulator of angiogenesis in endothelial cells (17, 18). However, Tubedown could have different functions in other cellular contexts (13, 19). Because TUBEDOWN expression is tightly down-regulated following embryonic neural development, we hypothesized that the persistence of Tubedown may be an important factor in pediatric tumors, such as neuroblastoma, which are thought to result from derangements in normal differentiation processes. The present study addresses a hypothesis that levels of Tubedown expression are linked to the differentiation status and aggressiveness of neuroblastic tumors and could represent an independent prognostic factor for neuroblastomas.
| Materials and Methods |
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MYCN fluorescence in situ hybridization. Analyses were done on representative sections (20). A commercial probe cocktail was used, consisting of a Spectrum Orangelabeled centromere enumerating probe 2 paired with a Spectrum Greenlabeled MYCN probe on 2p24 (Vysis, Inc., Downers Grove, IL). The probes were diluted 1:50 with tDenHyb hybridization buffer (Insitus Biotechnologies, Albuquerque, NM). For each hybridization, 100 nonoverlapping nuclei were enumerated for MYCN and centromere enumerating probe 2 signals. Cells with MYCN to centromere enumerating probe 2 ratios >4 or innumerable MYCN signals were considered amplified. In nonamplified cases, those with >10% cells containing more than two copies of centromere enumerating probe 2 were defined as having polysomy 2.
Cell cultures. LA-N-5 (21) and IMR-32 (22) cell lines were gifts from Dr. Thomas Inge (Cincinnati Children's Hospital Medical Center). The LA-N-5 and IMR-32 cells were respectively maintained in RPMI 1640 and in DMEM supplemented with 10% heat-inactivated fetal bovine serum (FBS) and 2 mmol/L glutamine. The SK-N-DZ and RF/6A (rhesus macaque choroid-retina endothelial) cell lines were acquired from the American Type Culture Collection (ATCC, Manassas, VA) and maintained, respectively, in RPMI 1640 and in DMEM supplemented with 10% FBS, 0.1 mmol/L nonessential amino acids, and 4 mmol/L glutamine. The EWS-96 cell line was derived from a tumor specimen obtained from a patient with Ewing's sarcoma and will be described elsewhere. Exponentially growing cells were used for every experiment.
All-trans-retinoic acid (Sigma, Oakville, Ontario, Canada) was dissolved in 5% DMSO and added to cells at an optimal concentration of 4 µmol/L. The medium (with or without retinoic acid) was changed every 3 days. Cells were photographed using a Leica DMIRE2 microscope system (Leica, Richmond Hill, Ontario, Canada) with a QImaging RETIGA Exi camera and Openlab software. Viability was assessed using trypan blue dye exclusion. All cell growth assays were done in triplicate.
Western blot. Cell lysates were prepared from snap-frozen tumor specimens and cell lines as described previously (11). Protein lysates were quantified using albumin as standard and analyzed by SDS-PAGE. Western blotting was done by standard procedures using enhanced chemiluminescence Plus chemiluminescence detection reagent (Amersham Biosciences, Piscataway, NJ) for anti-NF-M (Zymed Laboratories, San Francisco, CA), vimentin (Ab-1; Oncogene Research Products, San Diego, CA), c-Myb (C-19; Santa Cruz Biotechnology, Santa Cruz, CA), and anti-MycN (EMD Biosciences, San Diego, CA) antibodies. Ab1272 anti-Tubedown Western blot analyses were done as described (11, 15). All Western blots were stripped and reprobed with either extracellular signal-regulated kinase (ERK)-1 (Santa Cruz Biotechnology) or
-tubulin (Sigma) antibodies.
Tubedown immunohistochemistry. Sections from paraffin-embedded tissues were deparaffinized, postfixed in 4% paraformaldehyde, and incubated overnight with anti-Tubedown mouse monoclonal OE5 supernatant or negative control supernatant supplemented with control isotype-matched IgG2a antibody (DakoCytomation, Mississauga, Ontario, Canada) in 3% nonfat milk in TBS with 0.05% Tween 20. The mouse monoclonal OE5 hybridoma (18) recognizes Tubedown recombinant protein. Sections were developed using alkaline phosphatase and Vector Red Substrate kit (Vector Laboratories, Burlingame, CA) and photographed in triplicate using a Leica DMIRE2 microscope system with a QImaging RETIGA Exi camera and Openlab software.
Northern blotting and real-time reverse transcription-PCR. Northern blotting was done as described previously (11). Blots were hybridized with a 693-bp 32P-labeled MYCN cDNA probe (Image clone ID 5502743; ATCC) and reprobed with a mouse 18S ribosomal cDNA fragment to confirm loading equivalency and RNA integrity. Densitometric measurements of band intensity were completed using OptiQuant software.
For reverse transcription-PCR (RT-PCR) analysis, cDNA was prepared from total RNA using Roche Reverse Transcription kit (Roche, Branchburg, NJ). The cDNA was then amplified by real-time PCR with primers 5'-AACCCCAATGATGATGGAAA-3' and 5'-CCAAAGCAATAGATGGCTGA-3' specific for human Tubedown (Genbank accession no. BC039818) using a 7000 sequence detector system (Applied Biosystems, Foster City, CA). EWS-96 cells were used as a standard for the experiments. All experiments were done in at least triplicate.
Data and statistical analyses. To stratify neuroblastoma patients into low-, intermediate-, and high-risk groups, prognosis variables, including age at diagnosis, International Neuroblastoma Staging System, histopathology (International Neuroblastoma Pathology Classification), and MYCN amplification status, were used as described previously (4).
Tubedown immunostaining was quantified as described previously (23). Tubedown staining levels for each specimen were averaged and the average background levels were subtracted. To standardize single tumors and tumors from the tissue microarrays, paraffin-embedded sections from a Ewing's sarcoma xenograft tumor were used as a control in every experiment. Tubedown relative level of expression was calculated from a ratio of expression of each specimen over that of the Ewing's sarcoma tumor.
Quantitative analyses were compared using the two-tailed Student's t test with a Microsoft Excel program. Tests for homogeneity of variance were done as described.5 The data were considered to be statistically significant if the P value was
0.05.
| Results |
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There was a direct correlation between unfavorable histopathology of neuroblastoma specimens and a high level of Tubedown expression. High levels of Tubedown expression (1.38 ± 0.08 relative units) were present in the unfavorable tumors, whereas low levels of Tubedown expression (1.09 ± 0.07 relative units) were observed in the favorable tumors (P = 0.009; Fig. 3B). High levels of Tubedown (
1.3 relative units) were observed in 77% of unfavorable neuroblastoma tumors compared with 24% of favorable tumors. There was no correlation between the levels of Tubedown expression and whether the patient was diagnosed at an early age (less than 12 or 18 months of age). Tubedown expression did not correlate with MYCN amplification status of neuroblastoma tumors. Similarly, the treatment status of the neuroblastic tumors did not show significant correlation with Tubedown staining.
High levels of Tubedown in neuroblastoma tumors correlate with high-risk and low survival rate. Classification of our neuroblastoma cohort into three risk groups, low, intermediate, and high, revealed a significant positive correlation between high Tubedown expression and the high-risk neuroblastoma patients (Fig. 3D). Lower levels of Tubedown expression (1.00 ± 0.08 relative units) were detected in the low-risk neuroblastoma patients compared with the intermediate-risk (1.32 ± 0.12) and high-risk neuroblastoma patients (1.41 ± 0.06; P = 0.0004). High levels of Tubedown expression (
1.3 relative units) were observed in 73% of high-risk neuroblastoma cases compared with 21% in low-risk cases. Kaplan-Meier analysis (24) revealed significantly better outcomes for patients with low Tubedown expression compared with high expression (3-year overall survival; P = 0.038; Fig. 3C). Patients with low Tubedown expression had no notable events, whereas 46% of patients with high Tubedown expression relapsed or died. Moreover, high Tubedown expression (1.50 ± 0.05 relative units) was found in the patients who relapsed or succumbed to the disease (n = 8), whereas a low level of Tubedown expression (1.01 ± 0.10 relative units) was observed in patients who survived without relapse (n = 14).
Analysis of our neuroblastoma cohort revealed that the event-free survival rate of patients within the cohort depended on the International Neuroblastoma Staging System (stage IV: relative risk, 6.1), patient's age at diagnosis (
1 year: relative risk, 2.6), undifferentiated status (relative risk, 2.5), and MYCN amplification (relative risk, 1.1). The relative risk factors for our neuroblastoma cohort were comparable with other published cohorts (2527). The median age of the patient at diagnosis was 24 months (range, 0.1-288 months), and the percentage of MYCN amplified tumors was 29%.
Tubedown is down-regulated in neuroblastoma cells undergoing marked neuronal differentiation. Because Tubedown levels in the differentiated neuroblastic tumor subtypes (ganglioneuroma and ganglioneuroblastoma with minimal neuroblastic component) are low and because the state of neuroblastoma tumor cell differentiation is likely an important biological factor for the clinical outcome (8, 9), we examined Tubedown expression as a function of the differentiation of neuroblastoma cell lines in vitro. Tubedown expression was analyzed in neuroblastoma cell lines induced to undergo differentiation by treatment with retinoic acid. The extent of neuronal differentiation in response to retinoic acid treatment was first analyzed in three neuroblastic-type neuroblastoma cell lines (LA-N-5, IMR-32, and SK-N-DZ). On treatment with retinoic acid, LA-N-5 cells developed significantly more neurite-like processes (increased length and thickness) than controls (Fig. 4 ). Retinoic acid treatment of SK-N-DZ and IMR-32 cells did not significantly induce process development compared with controls (Fig. 4). Retinoic acid treatment resulted in moderate inhibition of cell growth in LA-N-5, whereas more significant growth inhibition was observed in IMR-32 and SK-N-DZ cells (Fig. 5 ). The retinoic acidinduced differentiation in LA-N-5 cells was accompanied with a marked up-regulation of neurofilament 160 kDa (NF-M) expression (Fig. 6A ). The SK-N-DZ and IMR-32 cells displayed a modest or no increase in NF-M expression on retinoic acid treatment (Fig. 6A). All three neuroblastoma lines treated with retinoic acid showed down-regulation of vimentin (Fig. 6B) and c-Myb expression (Fig. 6C). LA-N-5 and IMR-32 lines expressed high levels of MYCN transcript and protein. However, only LA-N-5 cells significantly down-regulated MYCN transcript (data not shown) and MycN protein (Fig. 6D) expression on retinoic acid treatment.
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| Discussion |
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However, because the range of Tubedown expression overlapped to a certain degree in low-risk versus high-risk patients and in tumors with favorable versus unfavorable histologic features, the determination of Tubedown levels in neuroblastic tumors may be more useful in multivariate analyses with other variables (age at diagnosis, International Neuroblastoma Staging System, histopathologic features, DNA ploidy, and MYCN amplification status).
The more differentiated subset of neuroblastic tumors (ganglioneuroblastoma with favorable histopathology and ganglioneuroma) expresses lower levels of Tubedown. However, the differentiation status within neuroblastoma specimens was not associated with significant differences in Tubedown expression. Because the International Neuroblastoma Pathology Classification system (8, 9) categorizes neuroblastoma tumors as differentiating if
5% of the cells seem differentiated, whereas poorly differentiated if
5% of cells seems differentiated (28), a 5% more or less of differentiated cells would not affect the overall levels of Tubedown expression within a given specimen. Tubedown levels may only be reduced if the tumor specimen presents significant levels of differentiation as seen in ganglioneuroblastoma and ganglioneuroma. Moreover, in vitro, reduction in Tubedown levels only occurs on extensive differentiation of neuroblastoma cells. In vitro, extensive neuronal differentiation was characterized by Tubedown suppression, increases in neurite-like formation and NF-M expression, but a marked decrease in MycN expression. Reductions in growth, vimentin, and c-Myb expression do not seem to be sufficient to lead to Tubedown suppression. Our in vitro analyses agree with the pattern of expression of Tubedown in neuroblastic tumors and indicate that Tubedown expression correlates with the differentiation status of neuroblastic tumors.
Tubedown levels did not correlate with MYCN amplification status of neuroblastoma tumors. MYCN amplification is a poor prognosis factor that is observed in
25% of neuroblastoma tumors (3). In our neuroblastoma cohort, MYCN was found amplified in 29% of neuroblastoma tumors, whereas high levels of Tubedown were found in 46% of neuroblastoma tumors. At least one other factor (the allelic loss of 11q chromosomal locus) associated with high-risk features, such as advanced stage, older age at diagnosis, and unfavorable histopathology, was reported not to correlate with MYCN amplification (4). Both MycN and Tubedown protein expression are reduced on marked retinoic acidinduced differentiation of the LA-N-5 neuroblastoma cell line (Fig. 6). However, although several studies have established a link between MYCN RNA and/or protein overexpression and poor outcomes, there is still some controversy surrounding this issue (29, 30). The relative risk of our neuroblastoma cohort for MYCN amplification was slightly low compared with the cohorts presented by others (25, 26). However, it is still clear that, within our neuroblastoma cohort, amplification of MYCN leads to a higher relative risk compared with tumors that are non-MYCN amplified.
To date, very few markers have been proven to represent an independent prognostic value for neuroblastic tumors (3, 4, 25). Higher levels of Tubedown expression in advanced-stage, histologically unfavorable, and high-risk group neuroblastoma could be the consequence of a more aggressive tumor phenotype or could indicate that Tubedown itself somehow drives the aggressiveness of neuroblastic tumors. In vitro, only marked differentiation of neuroblastoma cell lines is associated with reduced expression of Tubedown. In primary tumors, lower levels of Tubedown are observed in the more differentiated subsets of neuroblastic tumors. These results could indicate that Tubedown is involved in blocking differentiation. At present, the role of Tubedown in aggressive neuroblastic tumors is not clear. However, in yeast, the Tubedown homologue Nat1 acts in a complex with the acetyltransferase Ard1 to regulate a wide range of cellular processes, including cell growth and differentiation (3133). Similarly to the yeast system, Tubedown forms a complex with a mouse homologue of the yeast Ard1 acetyltransferase (mARD1; ref. 14) and is involved in cellular processes that regulate cell growth and differentiation in different cellular contexts (13, 18, 19).
Our results indicate that the levels of Tubedown expression are linked to the differentiation status and aggressiveness of neuroblastic tumors. Tubedown expression may be useful to more accurately define different neuroblastic tumor subsets and to provide a new independent prognostic indicator of neuroblastoma.
| Acknowledgments |
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| Footnotes |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
5 http://helios.bto.ed.ac.uk/bto/statistics/table8.html#Test%20for%20homogeneity ![]()
Received 7/18/06; revised 10/20/06; accepted 11/ 8/06.
| References |
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-acetyltransferase complex. Oncogene 2006;25:435060.[CrossRef][Medline]
)-acetyltransferase NatA is quantitatively anchored to the ribosome and interacts with nascent polypeptides. Mol Cell Biol 2003;23:740314.This article has been cited by other articles:
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H. Paradis, T. Islam, S. Tucker, L. Tao, S. Koubi, and R. L. Gendron Tubedown associates with cortactin and controls permeability of retinal endothelial cells to albumin J. Cell Sci., June 15, 2008; 121(12): 1965 - 1972. [Abstract] [Full Text] [PDF] |
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