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Human Cancer Biology |
Authors' Affiliations: 1 Ludwig Institute for Cancer Research, Melbourne Centre for Clinical Sciences, and 2 Department of Pathology, Austin Health, Heidelberg, Victoria, Australia; 3 Ludwig Institute for Cancer Research, Memorial Sloan Kettering Cancer Centre, and 4 Weill Cornell Medical College, New York, New York; and 5 Institute of Child Health, London, United Kingdom
Requests for reprints: Jonathan Cebon, Ludwig Institute for Cancer Research, Melbourne Centre for Clinical Sciences, Austin Health, Studley Road, Heidelberg, Victoria 3084, Australia. Phone: 61-3-9496-5462; Fax: 61-3-9457-6698; E-mail: Jonathan.cebon{at}ludwig.edu.au.
| Abstract |
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Experimental Design: ECSA/DPPA2 expression was examined in a panel of normal and tumor tissue by reverse transcription PCR, quantitative real-time PCR, and immunohistochemistry. A panel of 110 non–small cell lung cancers (NSCLC) were further investigated for the presence of ECSA/DPPA2 transcripts and several cancer testis antigens (CTA). Sera from 104 patients were analyzed for spontaneous ECSA/DPPA2 antibody production by ELISA and Western blot.
Results: ECSA/DPPA2 transcripts were limited to normal testis, placenta, bone marrow, thymus, and kidney but expressed in a variety of tumors most notably in 30% of NSCLC. Enrichment for CTAs in ECSA/DPPA2-positive NSCLC was observed. Immunohistochemistry confirmed nuclear and cytoplasmic localization in subpopulations of cells with coexpression of the CTA MAGE-A3. Antibodies to recombinant ECSA/DPPA2 protein were detected in the sera of 4 of 104 patients with NSCLC but not in healthy controls.
Conclusions: The restricted expression in normal tissues, expression in tumors with coexpression of CTAs, and spontaneous immunogenicity indicate that ECSA/DPPA2 is a promising target for antigen-specific immunotherapy in NSCLC.
Cancer testis antigens (CTA) are a group of antigens, many of which are immunogenic (12), characterized by restricted expression in testis but aberrant expression in a variety of cancer types including NSCLC (13). These properties render them attractive candidates for cancer vaccines, although their function is largely unknown. Indeed, vaccination with either the full-length recombinant CTA NY-ESO-1 protein, or CD4- or CD8-restricted peptide epitopes enhances anti–NY-ESO-1 reactivity (14, 15) such that tumor regression has been achieved in isolated cases (16).
Embryogenesis involves a deprogramming or erasure of the epigenetic information governing differentiated cell behavior, thus returning the cell to the proliferative, undifferentiated, stem cell state (17–19). By the blastocyst inner cell mass and the primordial germ cell stages, the embryonic cells are totipotent stem cells capable of giving rise to immortal cell lines in vitro and teratomas in vivo. Embryonic genes that are active at this stage may be associated with similar properties of deprogramming, maintenance of the undifferentiated cell state, proliferation, invasiveness, and indefinite growth of cancer cells. The identification of several embryo-cancer transcripts that are expressed in human preimplantation embryos, absent in normal differentiated somatic tissues, but re-expressed in tumor tissue supports this hypothesis (20). To search for novel molecules that may be immunotherapeutic targets, we explored genes known to be expressed in the preimplantation embryo but not expressed in differentiated somatic tissues. Of these transcripts, embryo-cancer sequence A (ECSA) subsequently entered into gene databases as developmental pluripotency associated-2 (DPPA2) has been the focus of this current study. This gene maps to chromosome 3q13 over 8 exons and encodes a protein product of 297 amino acids. The primary protein structure contains a SAP motif and localizes to the nucleus.
In this study, we show specific expression of this novel embryo-cancer antigen in a subpopulation of putative stem cells in NSCLC and show its ability to invoke spontaneous immune responses in vivo. We also show that ECSA/DPPA2 is coexpressed with many CTAs.
| Materials and Methods |
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Total RNA from normal tissues including brain, placenta, liver, heart, kidney, lung, bone marrow, colon, small intestine, spleen, stomach, and thymus were obtained from Clontech Laboratories.
Normal cadaveric tissues including brain, liver, heart, kidney, colon, stomach, and lung from five individual donors obtained under Institutional Review Board–approved protocols were investigated for ECSA/DPPA2 protein using immunohistochemistry.
RNA extraction and cDNA synthesis. Total RNA was isolated from frozen tumor tissue using RNeasy kits (Qiagen) or Ambion kits according to the manufacturer's recommendations. First-strand cDNA was synthesized from 2 µg of total RNA in a 20 µL reaction using 1 µg of random hexamer primer (Promega), 1 mmol/L deoxynucleoside triphosphate (Applied Biosystems), 40 units of RNase inhibitor, and 10 units Moloney murine leukemia virus reverse transcriptase (Invitrogen) for 60 min at 42°C. Reverse transcriptase was omitted for negative controls.
PCR. One microliter of cDNA (100 ng of total RNA) was used in each PCR reaction with a final concentration of 2 mmol/L magnesium chloride, 0.02 mmol/L deoxynucleoside triphosphate (Applied Biosystems), 0.625 units of Amplitaq gold DNA polymerase (Applied Biosystems), and 2 ng of primers. Two different PCR primers used were as follows: ECSA Fwd, 5'-AGACCAGATTACAGCGATGT with ECSA Rev, 5'-CGTAATAGGTTACATGATCTG, which amplified a gene fragment of 546 bp in the Ludwig/Austin data set; and DPPA2 Fwd, 5'-GCCCTTTGTTTATGGCCTGA and DPPA2 Rev, 5'-ACGCTTGGTTCCATTTGTTC, which amplified a gene fragment of 430 bp in the Cornell University data set. PCR was done using 35 amplification cycles at an annealing temperature of 50°C or 60°C, respectively. Other primers and annealing temperatures used for CTAs are summarized in Table 1 . PCR products were then visualized on a 1% agarose/ethidium bromide gel.
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Generation of recombinant ECSA/DPPA2 protein and antibodies. For prokaryotic expression construction of ECSA/DPPA2, the template vector pBluescriptR containing the cDNA clone BC018070 was PCR amplified with the following primers: 5'-TTTT GGATCC ATG TCA GAT GCA AAT TTG GAT and 3'-TTTT CTCGAG CTA CTT CTC TAC TGT CAT TAA (italics indicating the restriction sites), corresponding to nucleotides 126 to 1,022. PCR-amplified products were inserted into the Escherichia coli expression vector PGEX-4T, between BamH1 and XhoI restriction sites. The fusion protein (amino acids 1-298) was translated in-frame from the start codon of the vector. After sequence verification, the prokaryotic expression vector pGEX-4T-DPPA2 was introduced into the bacteria host E. coli following standard protocol, and the expression of fusion protein was induced by adding isopropyl-1-thio-D-galactopyranoside. The fusion protein was purified using the glutathione S-transferase tag. After 10% SDS-PAGE analysis, a band of 60 kDa was found from the sample of fusion proteins purified by glutathione-sepharose beads.
For antibody production, New Zealand rabbits were injected s.c. with 50 µg of the ECSA/DPPA2 antigen described above. For the first immunization, the antigen was admixed 1:1 with complete Freund's adjuvant; for the next four boosts (on days 28, 42, 60, and 78), incomplete Freund's adjuvant was used. Anti-ECSA/DPPA2 antibody production was determined by testing in an ELISA.
Affinity purification was achieved by coupling 1 mg of fusion protein to activated Sepharose 4B beads (Pharmacia) in accordance with the manufacturers' instruction. After conjugation, the beads were washed thrice with PBS and 25 mL of rabbit antiserum was added to the beads. The 5-mL column was washed once with 1 mol/L Tris-HCl (pH 8.0) and once with 1 mol/L Tris HCl (pH 5.0). The specific antibody was then eluted in 1 mol/L Tris HCl (pH 2.5).
ELISAs. Detection of specific serum antibody to ECSA/DPPA2 and NY-ESO-1 were done by indirect ELISA. Briefly, FluoroNunc Maxisorp ELISA plates were coated with 1.5 µg/mL of recombinant ECSA/DPPA2 or 3 µg/mL NY-ESO-1 protein (50 µL per well) and incubated overnight at 4°C. After washing with 0.2% Tween 20 and blocking with 0.1% human serum albumin (blocking buffer), sera diluted in blocking buffer at a 1:400 dilution were incubated at room temperature for 1 h. As the recombinant proteins were produced in E. coli bacteria, all sera were preadsorbed with E. coli lysates for 1 h at 4°C to remove potential contamination of serum E. coli antibodies that are often found in normal sera. After further washing, alkaline phosphatase–conjugated affinity-purified sheep anti-human IgG (Chemicon) diluted in blocking buffer at 1:1,000 dilution was added for 1 h at room temperature. P-nitro-phenyl phosphate substrate, carbonate buffer, and 2% magnesium chloride was added for 30 min at room temperature, and development stopped using 3 mol/L sodium hydroxide. Excitation at 450/50 and emission 580/50 with gain of 25 was read using an ELISA plate reader (Molecular Devices).
Immunohistochemistry. For detection of ECSA/DPPA2 protein, 5-µm sections from stored-frozen tissues were cut and fixed by immersing in cool acetone for 30 min. For paraffin sections, 4-µm formalin-fixed sections were prepared and dried overnight at 37°C. These were dewaxed in xylene and rehydrated through alcohols followed by water bath antigen retrieval for 20 min using EDTA buffer (pH 8.0; NeoMarkers). Endogenous peroxidase activity was quenched with 0.3% hydrogen peroxide for 10 min. After 10 min blocking with Maxitags protein-blocking agent (Immunon; Thermo Shandon), sections were incubated with affinity-purified ECSA/DPPA2-specific rabbit polyclonal antibody diluted in PBS at 1:400 dilution for 1 h at room temperature. Negative controls omitting the primary antibody and with a rabbit polyclonal antibody control (Vector Laboratories) were also incubated in parallel. Dako Envision+ horseradish peroxidase–labeled polymer (DakoCytomation) was added and incubated at room temperature for 30 min. Immunodetection was achieved by incubating the slides in 3-amino-9-ethyl-carbazole (Sigma-Aldrich) and counterstaining with Mayer's hematoxylin (Amber Scientific) and Scott's tap water before coverslipping.
NY-ESO-1 (E978), MAGE-A3 (6C1), and MAGE-C1 (CT7-33) antibodies were obtained from the Ludwig Institute for Cancer Research and used at a concentration of 2.5 µg/mL for E978 and a 1:40,000 dilution for CT7-33. Antigen retrieval was done for 20 min using EDTA buffer (pH 8.0; NeoMarkers) for E978 and citrate buffer (pH 6.0; NeoMarkers) for CT7-33. Dako Envision+ horseradish peroxidase–labeled polymer (DakoCytomation) was used as the secondary and immunodetection, done as described above. A mouse IgG1 isotype control (Southern Biotech) was incubated in parallel.
For double staining, sections were treated as described. ECSA/DPPA2-specific rabbit polyclonal antibody was diluted 1:800 and stained using Envision+ horseradish peroxidase–labeled polymer (DakoCytomation) as the secondary antibody and 3-3 Diaminabenzidine (Sigma-Aldrich) as the chromagen. NY-ESO-1 (E978) was used at the concentration described previously, and stained using the Envision+ AP-labeled polymer (DakoCytomation) and visualized using Fuchsin (DakoCytomation) as the chromogen.
Images were acquired using an Axioskop 2 microscope, Axiocam HRc camera, and Axiovision v3.1 software (CarlZeiss Vision).
| Results |
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ECSA/DPPA2 is coexpressed with CTAs. In view of the immunohistochemical findings of a possible relationship between the expression of ECSA/DPPA2 and the CTAs, we sought to further characterize any correlation with CTA expression by PCR. Figure 4
shows that the ECSA/DPPA2-positive tumors expressed those CTAs located on the X chromosome, such as the MAGE family, LAGE, and NY-ESO-1, at a much higher rate than the ECSA/DPPA2-negative tumors (
2 test, P = 0.001). MAGE-A4 in particular was expressed in 85% of ECSA/DPPA2-positive tumors compared with only 15% of ECSA/DPPA2-negative tumors. BORIS, a CTA not located on the X-chromosome, was also more likely to be expressed in ECSA/DPPA2-positive tumors (Fig. 4).
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| Discussion |
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ECSA was initially described in human preimplantation embryos, primordial germ cells, and several somatic tumors by Monk and Holding (20). Using a bioinformatics approach in the mouse, a homologous gene, Dppa2, was independently identified to have an expression pattern similar to Oct3/4 (23); one of several molecules including NANOG and SOX2 (24), which are characteristically present in pluripotent stem cells. Another molecule that shares this expression pattern in the mouse, Dppa4, lies 16-kB upstream of Dppa2 and encodes a closely related SAP domain (23, 25). These domains are thought to be involved in RNA metabolism and in the organization of nuclear architecture, suggesting that both may be involved in controlling cellular plasticity (26). Dppa2 and Dppa4 are both found exclusively in pluripotent cells; however, a recent study in murine embryonic stem cells suggests that Dppa4 may not be critical in maintenance of the pluripotent phenotype as its overexpression did not inhibit cellular differentiation (27). Further characterization is therefore necessary to document the role of these molecules in pluripotent cells.
Germ cells also express a number of these molecules, so it is not surprising that NANOG, OCT3/4, GDF3, and STELLAR have been found in germ cell tumors (28–30). In contrast, few publications, limited to breast (31–34) and bladder cancer (35), implicate these molecules in tumors arising from somatic cells. Their expression in somatic tumors may underpin biological functions that cancers share with embryonic cells, primordial germ cells, and possibly adult stem cells, such as self-renewal and proliferative potential. Suppression of differentiation is a hallmark of pluripotent embryonic cells, and although cancer cells may not necessarily have the capacity to proliferate along multiple differentiated lineages, loss of differentiation is a common feature.
The relationship between the embryo-associated antigen ECSA/DPPA2 and the germ cell–associated CTAs requires further study. ECSA/DPPA2-positive tumors were highly enriched for the CTAs (Fig. 4), and we have shown coexpression of the CTA MAGE-A3 with ECSA/DPPA2 in lung cancer cells. The CTAs are not known to be markers of pluripotent stem cells, although their expression in germ cells and various cancers suggests a role in primitive cell populations. A recent review of the CTAs by Simpson et al. (12) provides a conceptual framework that links cancer with germ cell development. The authors suggest that the epigenetic dysregulation and subsequent derepression of germ cell programs that would normally be silenced in somatic cells may contribute to dedifferentiation and the subsequent malignant phenotype in cancer cells. The interaction we have shown may be the result of the same epigenetic mechanisms that unmask gene expression programs in the malignant cell. In this case, the programs would be those also associated with stem cell function.
In grouping these molecules, we propose that ECSA/DPPA2 is best classified as an "Embryo-Cancer Antigen," as reflected by its association with embryogenesis rather than gametogenesis. Supporting this view is, first, that ECSA/DPPA2 is expressed in pluripotent embryonic cells, human embryonic stem cell lines, as well as primordial germ cells. In contrast, CTAs have not been reported to be expressed in human embryonic stem cells or preimplantation embryos. Second, ECSA/DPPA2 is coexpressed with other markers of pluripotent stem cells including OCT3/4 and NANOG (20, 25). The association between these molecules and ECSA/DPPA2 is closely linked, whereas a similar relationship with the CTAs has not been shown. Thus ECSA/DPPA2 seems to be a molecule that has unique associations because it belongs to a group of molecules that is implicated in pluripotent stem cells on the one hand and shares expression patterns in common with CTAs on the other.
Immunogenicity of these molecules in cancer patients has previously only been investigated for SOX2. Serum antibodies have been reported against SOX2 in meningioma and small cell lung cancer (36, 37), although it is unclear how these responses arose because SOX2 expression was not documented in the meningiomas, and expression in the small cell lung cancer patients was not investigated. A recent publication has also shown SOX2 antibodies in patients with monoclonal gammopathy of undetermined significance in which the SOX2 defined the clonogenic cells (38). In this study, the presence of serum antibody was also associated with T-cell responses and improved clinical outcome, although the numbers reported were small. It is intriguing that the pluripotent marker SOX2 marked the clonogenic cells and was immunogenic in monoclonal gammopathy of undetermined significance, a finding that parallels our own.
Spontaneous immune responses to pluripotent markers have not been previously described in NSCLC. Our data suggest that such responses do exist in a minority of patients, although their significance is as yet undefined. It is noteworthy that all of the sera tested were from resected early stage NSCLC, which potentially limited the exposure of tumor antigens to the immune system. It is unclear whether the two patients who were ECSA/DPPA2 antibody–positive but whose tumors did not seem to express ECSA/DPPA2 represent nonspecific antibody binding or whether their antibody responses reflect immune activation and "immunoediting" which could down-regulate tumor antigen expression (39).
Further studies will define the function and role of this antigen in NSCLC, stem cells, and gametogenesis and promise to provide important insight into pulmonary carcinogenesis. We believe ECSA/DPPA2 is a novel and promising therapeutic target for antigen-specific immunotherapy in lung cancer because it shows restricted expression in normal tissues, aberrant expression in a subpopulation of lung cancer cells, coordinate expression with X chromosome antigens and BORIS, and has the ability to generate spontaneous immune responses in a limited number of patients.
| Footnotes |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Note: M. Monk and J.S. Cebon share senior authorship.
6 http://www.roche-applied-science.com/sis/rtpcr/upl/adc.jsp ![]()
Received 5/28/07; revised 11/11/07; accepted 12/20/07.
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and lymphocytes prevent primary tumour development and shape tumour immunogenicity. Nature 2001;410:1107–11.[CrossRef][Medline]
C(T)) Method. Methods 2001;25:402–8.[CrossRef][Medline]This article has been cited by other articles:
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M. Monk, M. Hitchins, and S. Hawes Differential expression of the embryo/cancer gene ECSA(DPPA2), the cancer/testis gene BORIS and the pluripotency structural gene OCT4, in human preimplantation development Mol. Hum. Reprod., June 1, 2008; 14(6): 347 - 355. [Abstract] [Full Text] [PDF] |
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