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Cancer Therapy: Preclinical |
Authors' Affiliations: 1 Cancer Research UK Centre for Cancer Therapeutics at The Institute of Cancer Research, Sutton, Surrey, United Kingdom; 2 Cancer Research UK Centre for Cell and Molecular Biology at The Institute of Cancer Research, London, United Kingdom; and 3 Vion Pharmaceuticals, Inc., New Haven, Connecticut
Requests for reprints: Caroline J. Springer, Cancer Research UK Centre for Cancer Therapeutics at The Institute of Cancer Research, 15 Cotswold Road, Sutton, Surrey SM2 5NG, United Kingdom. Phone: 44-20-8722-4214; Fax: 44-20-8722-4046; E-mail: caroline.springer{at}icr.ac.uk.
| Abstract |
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Experimental Design: We characterized CPG2 expression in vectors by immunoblotting, immunofluorescence, and enzyme activity. We assessed prodrug activation by high-performance liquid chromatography. Target human tumor cell and bacterial vector cell cytotoxicity was measured by flow cytometry and colony-forming assays. Therapy was shown in two human tumor xenografts and one mouse allograft with postmortem analysis of bacterial and CPG2 concentration in the tumors.
Results: CPG2 is expressed within the bacterial periplasm. It activates prodrugs and induces cytotoxicity in human tumor cells but not in host bacteria. Following systemic administration, bacteria multiply within xenografts reaching 2 x 107/g to 2 x 108/g at 40 days postinoculation. The concentration of CPG2 in these tumors increases steadily to therapeutic levels of 1 to 6 units/g. The bacteria alone reduce the growth of the tumors. Subsequent administration of prodrugs further reduces significantly the growth of the xenografts.
Conclusions: The bacteria multiply within tumors, resulting in a selective expression of CPG2. The CPG2-expressing bacteria alone reduce the growth of tumors. However, in the presence of prodrugs activated by CPG2, this oncolytic effect is greatly increased. We conclude that bacterial oncolytic therapy, combined with CPG2-mediated prodrug activation, has great potential in the treatment of a range of cancers.
, causing septic shock in infected patients (10). The purI gene is involved in purine biosynthesis. Thus, purI deletion mutants are auxotrophic for purines but have been shown to proliferate in tumors (11), although the mechanism is unknown. Animal studies (12) and phase I clinical studies (13) have established the safe doses for systemic injection of VNP20009. The maximum tolerated dose was 3 x 108 colony-forming units (cfu)/m2, with dose-limiting toxicities encountered in patients receiving 1 x 109 cfu/m2, and focal tumor colonization observed in 3 of 24 patients (13). In the preclinical studies, intratumoral bacterial proliferation occurred to levels of 109 cfu/g, 10,000-fold higher than in the liver (the next most colonized tissue; ref. 10), these levels being too low to generate systemic toxicity. As a consequence of this selective colonization, perhaps involving immune responses (14), VNP20009 exerts an oncolytic effect and is effective in dogs with spontaneous cancers (15). We sought to enhance the efficacy further by engineering the bacteria to express the prodrug-activating enzyme carboxypeptidase G2 (CPG2; E.C. 3.4.17.11). The gene encoding CPG2 was originally cloned from Pseudomonas sp. strain RS-16 (16). The enzyme is a Zn2+-dependent 83-kDa homodimer. CPG2 cleaves folic acid to pteroic acid and also activates a range of bifunctional alkylating agent and antibiotic prodrugs (17–22). CPG2 possesses several properties that make it suitable for suicide gene therapy. There is no human analogue, and no cofactors are required; it catalyzes a one-step activation, produces drugs that are cytotoxic to both cycling and quiescent cells, and can activate a large range of prodrugs. CPG2 catalyzes the hydrolysis of a deactivating glutamate moiety from various nitrogen mustard prodrugs to yield bifunctional alkylating agents that are more reactive than the prodrug and, being less polar, have greater penetration into cells where they produce DNA-DNA interstrand cross-links and cell death. A large number of these aromatic nitrogen mustard prodrugs have been synthesized. They vary in the leaving group of the mustard moiety, the nature of the moiety para to the mustard (phenol, aniline, or benzoate), and substitutions to the aromatic ring. Here, we focus on these prodrugs that are cleaved to benzoic acid mustards that were effective against xenografts engineered to express CPG2 (23). They vary in the mustard-leaving groups and in degrees of fluorination of the aromatic ring.
The potential of CPG2 in combination with prodrug 2 (4-[(2-chloroethyl)(2-methylsulphonyloxyethyl)amino]benzoyl-L-glutamic acid) was first shown in antibody-directed enzyme prodrug therapy (24). CPG2 plus another prodrug, 1 (4-[bis(2-iodoethyl)amino]-phenyloxycarbonyl-L-glutamic acid), is the second antibody-directed enzyme prodrug therapy system to reach clinical trials (25). The safe dose of 4-[bis(2-iodoethyl)amino]-phenyloxycarbonyl-L-glutamic acid depended on dose of CPG2 antibody and time allowed for blood clearance, but typically 537.6 mg/m2 was safe when circulating enzyme was <0.005 units CPG2/mL, giving rise to an AUCinf of 3,408 µg/mL min, dose-limiting toxicities being liver, kidney, and marrow (25). Gene-directed enzyme prodrug therapy with CPG2 has also been developed and we have recently described a conditionally replicating oncolytic adenoviral vector that leads to expression of CPG2 selectively in telomerase-positive tumor cells. In combination with prodrug 1, this adenovirus induced tumor regressions and cures in xenograft models of human hepatocellular carcinoma (26) and colon carcinoma (27).
A crucial beneficial aspect of these therapies is the presence of a "bystander effect" where nontargeted tumor cells are killed by activated drug diffusing away from cells expressing CPG2. This is a powerful feature of the CPG2-activated drugs and was shown both in vitro with prodrugs 2 (28) and 1 (29) and in vivo in both transfected xenografts with prodrug 2 (30) and prodrugs 1, 3, and 4 (23) and virally targeted xenografts with prodrug 1 (27).
We rationalized that VNP20009 could deliver high concentrations of CPG2 selectively to a wide range of tumor types for activation of a range of prodrugs. Here, we describe the generation, properties, and efficacy of the oncolytic bacterium VNP20009, engineered as a vector to express CPG2 selectively in tumors, where activation of prodrugs produces a therapeutic benefit.
| Materials and Methods |
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Cell lines
MDA-MB-361 (human breast carcinoma), WiDr (human colon carcinoma), and B16-F10 (mouse melanoma) cell lines were all cultured in DMEM (Life Technologies) plus 10% fetal bovine serum (Life Technologies) at 37°C in a 5% CO2 atmosphere and passaged conventionally.
Bacterial strains and culture conditions
A S. typhimurium derivative named VNP20009 (purI-, msbB-), selected to be comparatively nontoxic and to preferentially colonize tumors, was initially employed to express periplasmic CPG2 (ppCPG2). An asd- derivative of VNP20009, VNP20009asd- (purI-, msbB-, asd-; Vion Pharmaceuticals), provided effectively stable expression of ppCPG2 in the absence of antibiotic. These strains were propagated aerobically in special Luria-Bertani broth (without NaCl and supplemented with 2 mmol/L CaCl2 and 2 mmol/L MgCl2) at 37°C shaken at 300 rpm or on special Luria-Bertani agar plates. If required, the broth was supplemented with the antibiotic carbenicillin at 50 µg/mL. VNP20009asd- lacking pYA3332 was grown by supplementing the culture with diaminopimelic acid 50 µg/mL. A Salmonella strain deficient in restriction endonucleases with intact methylation (YS501) was used to passage plasmids to provide the methylation necessary for transforming VNP20009.
Generation of constructs
The expression vector for ppCPG2 was constructed using the plasmid pTrc99A containing the lac/trp promoter (Pharmacia; ref. 34) and the β-lactamase gene, which mediates ampicillin/carbenicillin resistance (pTrcOMPAppCPG2). CPG2 resides in the periplasm of Pseudomonas sp. and is directed to this location by a 20–amino acid leader sequence (35). We replaced the wild-type CPG2 leader sequence with the leader sequence of the gene ompA that has previously been used very efficiently to direct recombinant proteins to the periplasm of Gram-negative bacteria. This was done to ensure that CPG2 was correctly exported to the periplasm of Salmonella, as the Pseudomonas signal peptide has not been documented to work in these cells (36). The plasmid was used to generate a CPG2-expressing strain (ppCPG2-VNP20009) and a nonexpressing empty vector (EV-VNP20009). An improved version designed for selection-free stable expression was based on a balanced lethal system (37). The host, VNP20009asd-, lacks the vital asd gene and only survives on medium supplemented with diaminopimelic acid or when transformed by the plasmid pYA3332, which supplies the missing asd gene. We engineered pYA3332 to express ppCPG2 and transformed it into VNP20009asd- producing the new strain ppCPG2-VNP20009asd-.
Immunoblotting
SDS-PAGE gels were transferred to an Immobilon-P membrane (Millipore) and the membranes were blocked with 5% nonfat dried milk powder. Immunodetection of CPG2 by a previously described (29) rabbit polyclonal antiserum was followed by a donkey anti-rabbit antibody conjugated to horseradish peroxidase. Detection was by enhanced chemiluminescence reagent (Amersham Pharmacia).
Determination of CPG2 enzymic activity in bacteria
Bacteria were lysed with a nonionic detergent ("Bug Buster" Novagen) and CPG2 activity in the extract was determined by a kinetic method using methotrexate as substrate (29). Briefly, aliquots were added to cuvettes containing assay buffer and methotrexate, and the rate of decrease in A320 was measured spectrophotometrically. CPG2 (1 unit) is defined as the amount that degrades 1 mmol methotrexate/min.
Immunofluorescence
Bacteria were harvested by centrifugation, washed once in PBS, and fixed with 3% paraformaldehyde. For permeabilization, cells were resuspended in 0.1% Triton X-100, washed, and resuspended in PBS/lysozyme (100 µg/mL)/5 mmol/L EDTA. Samples were incubated with anti-CPG2 rabbit antiserum followed by labeled anti-rabbit antibody (Alexa 488 nm; Molecular Probes/Invitrogen). The DNA was counterstained with TO-PRO-3 dye (Molecular Probes/Invitrogen) and the samples were viewed using a confocal microscope.
Cell fractionation
Bacteria were lysed using osmotic shock. Briefly, bacteria were resuspended in a hyperosmotic solution containing 20% buffered sucrose (pH 8) on ice for 10 min, centrifugally pelleted, resuspended in plain buffer, and incubated on ice for another 10 min at which stage the outer cell membrane ruptures. The inner cell membrane and cytoplasm (spheroplasts) were centrifugally harvested at 4,000 rpm. The periplasm and outer membrane in the supernatant were harvested at 50,000 x g for 30 min. The amount of CPG2 in each subcellular fraction was determined by immunoblotting. Gel loading was standardized by adjusting the percentage of the total harvest for each subcellular fraction.
Assessment of cytotoxicity
Cell cycle analysis by flow cytometry. WiDr cells were seeded in six-well plates (1 x 106 per well) 16 h before addition of prodrug 1 (40 µmol/L) and bacterial vectors at concentrations as indicated. After 90 min, the cells were washed three times with fresh medium containing penicillin (12 µg/mL), streptomycin (20 µg/mL), and chloramphenicol (10 µg/mL) and incubated for a further 2 days. This dose-time of 40 µmol/L x 90 min = 3600 µmol/L min is commensurate with the AUC of 5,763 µmol/L min resulting from the safe dose of 537.6 mg/m2 used in phase I clinical trial (25). Adherent and detached cells were harvested, washed in PBS, and fixed in 70% ethanol. The cells were washed in PBS and resuspended in PBS containing RNase (10 µg/mL) and propidium iodide (40 µg/mL). The samples were incubated at 37°C for 30 min and analyzed by flow cytometry (FACSCalibur; Becton Dickinson; software package: CellQuest). Data from 20,000 cells were plotted as counts (abscissa) versus fluorescence intensity (ordinate).
Colony-forming assay. WiDr cells were exposed to prodrug in the presence or absence of vectors as above. After the initial 90-min exposure, cells were replated in antibiotic-containing medium at limiting dilutions, allowed 14 days growth, fixed in 70% cold ethanol, and stained with crystal violet (1%, w/v). Colonies were scored and cell survival was expressed as percentage of control.
Determination of prodrug activation in ppCPG2-VNP20009asd-
VNP20009 or ppCPG2-VNP20009asd- was suspended in PBS/1% glucose/2 mmol/L MgSO4, and prodrug 2 was added to 1 mmol/L. Aliquots were spun down and the supernatants were frozen in liquid nitrogen. The samples were quickly thawed, and aliquots (50 µL) were injected onto a C18 column (Whatman Partisphere 4.6 x 100 mm), eluted with a gradient of 20% to 90% methanol/100 mmol/L ammonium acetate (pH 7) over 15 min, and monitored from 250 to 350 nm. Chromatograms were integrated at 300 nm.
In vivo therapy
All experiments were conducted in accordance with UK Home Office regulations and UK Coordinating Committee on Cancer Research guidelines (38). Xenografts or allografts were established in nude (nu/nu) female CD1 or C57 black female mice (20-22 g) by s.c. inoculation (0.2 mL) in the right flank of MDA-MB-361 human breast carcinoma or WiDr human colon carcinoma cells (107 and 8 x 106, respectively) or B16-F10 mouse melanoma cells (4 x 105) in PBS. After 8 (WiDr), 10 (B16-F10), or 12 (MDA-MB-361) days, mice were allocated by stratified distribution into control and treated groups. ppCPG2-VNP20009asd- (2 x 106 cfu) were diluted in PBS/2 mmol/L MgSO4 and injected into the tail veins. Prodrugs were dissolved in DMSO and diluted 20-fold in 1.26% (w/v) sodium bicarbonate just before injection. Each course of prodrug treatment consisted of three i.p. injections over a 24-h period to a total preestablished maximum tolerated dose of 1,500, 1,200, and 600 mg/kg for prodrugs 2, 3, and 4, respectively. Courses of prodrug were administered on days 7, 14, 28, 35, and 42 (±1 day) after vector. Animals were culled if the tumor exceeded 1.5 cm in any dimension, or if a scab formed, as demanded by the UK Home Office license requirement (38). At cull, tumors were excised and analyzed for CPG2 enzyme activity and for the presence of colony-forming bacterial cells. Similar measurements were performed in separate time-course experiments and the data were pooled.
Determination of CPG2 enzyme activity and bacterial cfu in tumors
Tumors were homogenized in PBS/2 mmol/L MgSO4 at 10% (w/v). CPG2 enzyme activity was determined as described previously (39). Briefly, homogenates were incubated with methotrexate for 30 min, and the reaction was stopped with acidified methanol. The concentration of the reaction product diaminomethylpteroic acid in the centrifuged supernatant was determined by high-performance liquid chromatography. An external calibration curve was constructed by spiking control homogenates with standard enzyme. Bacterial cfu were determined by serially diluting homogenates in growth medium and plating on agar plates. Dilutions that gave 10 to 200 colonies after overnight culture were scored. The results were expressed as enzyme units or cfu per wet weight gram of tumor.
Statistical analysis
All analyses were performed using the functions described in Results using GraphPad Prism version 4.02 for Windows, GraphPad Software. Computed values are quoted with their 95% confidence intervals in brackets.
| Results and Discussion |
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42 kDa) in transformed bacteria was confirmed by immunoblotting (Fig. 1A
) and enzymic activity by methotrexate digestion (Fig. 1B). The subcellular localization of CPG2 in ppCPG2-VNP20009 was verified by immunofluorescence of intact or permeabilized cells (Fig. 1C). Staining was observed only after permeabilization, indicating internal expression of ppCPG2. The majority of the CPG2 was present in the periplasm as confirmed by immunoblotting of the cytoplasmic, periplasmic, and outer membrane subcellular fractions (Fig. 1D).
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Production of active drug and effect on bacterial viability. ppCPG2-VNP20009 requires ampicillin selection to maintain CPG2 expression. This would be a drawback in vivo where selection would be difficult. We therefore moved the ompACPG2 gene construct to the plasmid pYA3332 and used the resulting plasmid pYA3332 ompA-CPG2 to transform the bacterium VNP20009asd-, generating the effectively stable vector ppCPG2-VNP20009asd-, which produced similar levels of ppCPG2 activity to ppCPG2-VNP200009. To investigate the in vivo therapeutic efficacy of the suicide gene therapy, we selected the benzoyl glutamate prodrugs 2 to 4 that have previously been proven effective in transfected xenograft models (23) and investigated prodrug activation with ppCPG2-VNP200009asd-. Prodrug 2 has the benefits for chromatographic studies of being more stable than prodrug 1, easier to separate, and detect by UV absorbance and yielding a readily detectable drug (2a). Both prodrug 2 and drug 2a are unstable in aqueous medium, but their respective degradation product peaks could be identified by incubation of authentic compounds in plain buffer. When we incubated prodrug 2 with cultures of VNP20009 or ppCPG2-VNP20009asd-, a time-dependent loss was observed (Fig. 3A ), which is faster for cultures of ppCPG2-VNP20009asd-. However, whereas prodrug 2 and its degradation products are seen in supernatant fractions from both cultures of VNP20009 and ppCPG2-VNP20009asd-, drug 2a and its degradation products are seen only in the supernatant from ppCPG2-VNP20009asd-. All retention times (2, 3.8 min, products 2.5 and 7.0 min; 2a, 5.5 min, products 4.1 and 9.2 min) and spectra matched those from authentic compound. We conclude that prodrug 2 accesses the periplasm and is converted to the cognate drug 2a, which is then released into the surrounding medium. The rates of loss of the prodrug are plotted against time and fitted to an exponential decay (Fig. 3A). The rate constants differ significantly from each other [F(DFn,DFd): 5.9 (1,8); P = 0.041]. From the difference, we then calculated the extent of activation-specific prodrug 2 loss (Fig. 3A).
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In vivo tumor colonization by ppCPG2-VNP20009asd- and CPG2 expression. We determined the numbers of live ppCPG2-VNP20009asd- bacteria recovered from the MDA-MB-361, WiDr, and B16-F10 tumors and plotted them against the time from the original inoculation. Bacterial colonization of the tumors proceeds similarly in all three tumor types, initially increasing rapidly then tending toward a maximum (Fig. 4 ). The best fit to the data was a hyperbola, enabling a prediction of the maximum bacterial load (nonoverlapping 95% confidence intervals in brackets), which was approximately 7 times higher in B16-F10 (1.7 x 108 cfu/g; 8.3 x 107-3.5 x 108) than in WiDr (2.5 x 107; 1.0 x 107-6.3 x 107) but with the corresponding value for MDA-MB-361 (2.1 x 108), having a very broad 95% confidence interval. In WiDr, these values for bacterial load per gram are significantly lower than those per milliliter, producing the greatest cell kill in six-well plates (Fig. 2C). However, in vitro, the bacteria are distributed throughout the medium with only a small proportion being in close contact with the cells. The time to half-maximal colonization is longer in MDA-MB-361 [6.2 days (3.3-9.2)] than in WiDr [1.8 days (1.2-2.5)] or B16-F10 [1.2 days (0.8-1.6)]. During the same period, the amount of CPG2 enzyme activity in the tumors was also determined (Fig. 5 ). After an average initial lag (expressed as the X intercept when Y = 0) of 4.2 days that did not differ significantly among the three cell lines, the CPG2 activity increased linearly. The greatest rate of accumulation of CPG2, calculated as the slope, was seen in B16-F10 [Fig. 5C; 0.29 units/g/d (0.22-0.35)] followed by WiDr [Fig. 5B; 0.11 units/g/d (0.069-0.153)] and MDA-MB-361 [Fig. 5A; 0.037 units/g/d (0.015-0.058)]. The lack of a plateau in CPG2 activity to mirror that in bacterial load suggests that either CPG2 expression continues to build in the existing bacteria after they have become stationary or there is death and release of CPG2 from some bacteria but sufficient division to replace their number. The levels of CPG2 in the tumors after 20 days derived from these regressions approximated those shown previously to be sufficient to eradicate tumors in a transfected model [MDA-MB-361 0.59 units/g measured, 0.6 units/g historical (30); 2.0 units/g; WiDr 1.57 units/g measured, 2.0 units/g historical (23)] and are higher in B16-F10 tumors (5.0 units/g).
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In summary, we have shown that attenuated oncolytic Salmonella can act as a vector for the prodrug-activating enzyme CPG2. We have shown that the enzyme, located in the bacterial periplasm, induces cytotoxicity in mammalian tumor cells by converting prodrugs to their active form, but the bacteria themselves are not killed by the activated drugs. The bacteria colonize tumors and multiply within them, resulting in a selective accumulation of CPG2. As is the case with the nonexpressing bacterium from which they were derived, the CPG2-expressing bacteria alone have a significant effect on the growth of tumors. However, in the presence of prodrugs for CPG2, this oncolytic effect is considerably enhanced. We conclude that bacterial oncolytic therapy, combined with CPG2-mediated prodrug activation, has great potential in the treatment of a range of cancers.
| Disclosure of Potential Conflicts of Interest |
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| Footnotes |
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The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
Note: F. Friedlos and P. Lehouritis contributed equally to this work.
Current address for D. Bermudes: Celator Pharmaceuticals Corp., Vancouver, British Columbia, Canada V6P6P2.
Received 11/ 5/07; revised 1/18/08; accepted 2/12/08.
| References |
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induction retain tumor-targeting in vivo. Nat Biotechnol 1999;17:37–41.[Medline]
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