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Imaging, Diagnosis, Prognosis |
Authors' Affiliations: 1 Laboratory of Molecular Medicine, Human Genome Center, Institute of Medical Science, The University of Tokyo, Tokyo, Japan; 2 Department of Surgical Oncology, Hokkaido University Graduate School of Medicine, Sapporo, Japan; 3 Department of Thoracic Surgery, Saitama Cancer Center, Saitama, Japan; and 4 Kanagawa Cancer Center Research Institute, Kanagawa, Japan
Requests for reprints: Yataro Daigo, Institute of Medical Science, The University of Tokyo, Laboratory of Molecular Medicine, Human Genome Center, Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-Ward, Tokyo 108-8639, Japan. Phone: 81-3-5449-5457; E-mail: ydaigo{at}ims.u-tokyo.ac.jp.
| Abstract |
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Results: Northern blot and immunohistochemical analyses detected expression of DLX5 only in placenta among 23 normal tissues examined. Immunohistochemical analysis showed that positive immunostaining of DLX5 was correlated with tumor size (pT classification; P = 0.0053) and poorer prognosis of non–small cell lung cancer patients (P = 0.0045). It was also shown to be an independent prognostic factor (P = 0.0415). Treatment of lung cancer cells with small interfering RNAs for DLX5 effectively knocked down its expression and suppressed cell growth.
Conclusions: These data implied that DLX5 is useful as a target for the development of anticancer drugs and cancer vaccines as well as for a prognostic biomarker in clinic.
Systematic analysis of expression levels of thousands of genes using cDNA microarray is an effective approach to identify molecules involved in carcinogenic pathways that can be candidates for development of novel therapeutics and diagnostics. We have been attempting to isolate potential molecular targets for diagnosis and/or treatment of lung cancer by analyzing genome-wide expression profiles of various types of lung cancer cells on a cDNA microarray containing 27,648 genes, using tumor-cell populations purified by laser microdissection (7–10). To verify the biological and clinicopathologic significance of the respective gene products, we did high-throughput screening of loss-of-function effects by means of the RNA interference technique as well as tumor tissue microarray analysis of clinical lung cancer materials (7–29). This systematic approach revealed that distal-less homeobox 5 (DLX5) was frequently overexpressed in the majority of primary lung cancers.
Homeobox genes are transcription factors of fundamental importance during development throughout evolutionarily diverse species. The redundant function of the Dlx genes was explained by their nearly identical homeodomains, whereas individual unique functions were supposed to be due to the divergence of their amino acid sequences in other domains (30). Inactivation of homeobox genes have been implicated in many congenital malformations as well as development of cancers (31). DLX5 is considered to be a master regulatory protein essential in initiation of the cascade involved in osteoblast differentiation and to play a critical role in regulation of mammalian limb development as shown by the evidences that the targeted disruption or ablation of Dlx5 and Dlx6 caused developmental abnormality of bone and inner ear, and craniofacial defects (32). However, the roles of DLX5 activation in carcinogenesis have not been clarified.
In this study, we describe that overexpression of DLX5 could contribute to the malignant nature of lung cancer cells. We suggest that targeting the DLX5 molecule might hold promise for development of a new diagnostic and therapeutic strategy in the clinical management of lung cancers.
| Materials and Methods |
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Semiquantitative reverse transcription-PCR. Total RNA was extracted from cultured cells and clinical tissues using Trizol reagent (Life Technologies, Inc.) according to the manufacturer's protocol. Extracted RNAs and normal human tissue polyadenylate RNAs were treated with DNase I (Nippon Gene) and reversely transcribed using oligo (dT) primer and SuperScript II reverse transcriptase (Invitrogen). Semiquantitative reverse transcription-PCR (RT-PCR) experiments were carried out with the following DLX5-specific primers or with ACTB-specific primers as an internal control: DLX5, 5'-CTCGCTCAGCCACCACCCTCAT-3' and 5'-AGTTGAGGTCATAGATTTCAAGGCAC-3'; ACTB, 5'-GAGGTGATAGCATTGCTTTCG-3' and 5'-CAAGTCAGTGTACAGGTAAGC-3'. PCR reactions were optimized for the number of cycles to ensure product intensity within the logarithmic phase of amplification.
Northern blot analysis. Human multiple tissue blots (BD Biosciences Clontech) were hybridized with a 32P-labeled PCR product of DLX5. The cDNA probes of DLX5 were prepared by RT-PCR using the primers described above. Prehybridization, hybridization, and washing were done according to the supplier's recommendations. The blots were autoradiographed at room temperature for 30 h with intensifying BAS screens (BIO-RAD).
Anti-DLX5 antibodies. Plasmids expressing full-length fragments of DLX5 that contained His-tagged epitopes at their NH2 terminals were prepared using pET28 vector (Novagen). The recombinant peptides were expressed in Escherichia coli, BL21 codon-plus strain (Stratagene), and purified using TALON resin (BD Bioscience) according to the supplier's protocol. The protein, extracted on an SDS-PAGE gel, was inoculated into rabbits; the immune sera were purified on affinity columns according to standard methodology. Affinity-purified anti-DLX5 antibodies were used for Western blotting as well as immunocytochemical and immunohistochemical studies. We confirmed that the antibody was specific to DLX5 on Western blots using lysates from cell lines that had been transfected with DLX5 expression vector and those from lung cancer cell lines, either of which expressed DLX5 endogenously or not, as well as by immunocytochemical staining of the cell lines.
Western blot analysis. Cells were lysed in lysis buffer; 50 mmol/L Tris-HCl (pH 8.0), 150 mmol/L NaCl, 0.5% NP40, 0.5% deoxycholate-Na, 0.1% SDS, plus protease inhibitor (Protease Inhibitor Cocktail Set III; Calbiochem Darmstadt). We used an enhanced chemiluminescence Western blotting analysis system (GE Healthcare Bio-sciences). SDS-PAGE was done in 12% polyacrylamide gels. PAGE-separated proteins were electroblotted onto nitrocellulose membranes (GE Healthcare Bio-sciences) and incubated with a rabbit polyclonal anti-human DLX5 antibody (generated to recombinant DLX5; please see above). A donkey anti-rabbit IgG-horseradish peroxidase antibody (GE Healthcare Bio-sciences) was served as the secondary antibodies.
Immunocytochemistry. SBC-5 cells were seeded on coverslips, and cells were fixed in 4% formamide and permeabilized with cold methanol acetone (50:50) for 5 min at room temperature. After washing in PBS once, cells were incubated with the anti-DLX5 antibody for 1 h at room temperature, followed by incubation with Alexa488-conjugated goat anti-rabbit antibodies (Molecular Probes; 1:1,000 dilution) for 1 h in the dark. Images were captured on a confocal microscope (TCS SP2-AOBS; Leica Microsystems).
Immunohistochemistry and tissue microarray analysis. To investigate the presence of DLX5 protein in clinical materials, we stained tissue sections using ENVISION+ kit/horseradish peroxidase (DakoCytomation). For antigen retrieval, slides were immersed in Target Retrieval Solution High pH (DakoCytomation) and boiled at 108°C for 15 min in an autoclave. Seven micrograms per milliliters of affinity-purified rabbit polyclonal anti-DLX5 antibodies (generated to recombinant DLX5; please see above) were added after blocking of endogenous peroxidase and proteins, and each section was incubated with horseradish peroxidase–labeled anti-rabbit IgG as the secondary antibody. Substrate chromogen was added and the specimens were counterstained with hematoxylin. Tumor tissue microarrays were constructed as published elsewhere, using formalin-fixed archived NSCLCs obtained by a single institutional group with an identical protocol to collect and fix the tissues after resection (13–28, 33–35). Considering the histologic heterogeneity of individual lung tumors, tissue areas for sampling were selected based on visual alignment with the corresponding HE-stained sections on slides. Three, four, or five tissue cores (diameter, 0.6 mm; height, 3-4 mm) taken from donor tumor blocks were placed into recipient paraffin blocks using a tissue microarrayer (Beecher Instruments). A core of normal tissue was punched from each case. Five-micrometer sections of the resulting microarray block were used for immunohistochemical analysis. Three independent investigators assessed the staining pattern of nuclear and cytoplasmic DLX5 (n-DLX5 and c-DLX5) individually, without prior knowledge of clinicopathologic data. Because the intensity of staining within each tumor tissue core was mostly homogenous, the intensity of DLX5 staining was semiquantitatively evaluated using following criteria: strong positive (2+), dark brown staining in >50% of tumor cells completely obscuring nucleus or cytoplasm; weak positive (1+), any lesser degree of brown staining appreciable in tumor cell nucleus or cytoplasm; and absent (scored as 0), no appreciable staining in tumor cell nucleus or cytoplasm. Lung cancers were scored as n-DLX5 or c-DLX5–strongly positive (2+) only if all reviewers defined them as such.
Statistical analysis. All analyses were done using statistical analysis software (StatView, version 5.0; SAS Institute, Inc.). We examined correlations between its expression levels and clinicopathologic variables such as age, gender, pathologic tumor-node-metastasis stage, and histologic type. Strong DLX5 immunoreactivity was assessed for association with clinicopathologic variables using the Fisher's exact test. Univariate and multivariate analyses were done with the Cox proportional hazard regression model to determine associations between clinicopathologic variables and cancer-related mortality. First, we analyzed associations between death and possible prognostic factors including age, gender, histologic type, pT classification, and pN classification, taking into consideration one factor at a time. Second, multivariate Cox analysis was applied on backward (stepwise) procedures that always forced DLX5 expression into the model, along with any and all variables that satisfied an entry level of a P value of <0.05. As the model continued to add factors, independent factors did not exceed an exit level of a P value of <0.05.
RNA interference assay. We had previously established a vector-based RNA interference system, psiH1BX3.0, which was designed to generate siRNAs in mammalian cells (12). Using 30 µL of Lipofectamine 2000 (Invitrogen), we transfected 10 µg of DLX5-specific siRNA expression vector into SBC-5 and NCI-H1781 cell lines that endogenously overexpressed DLX5. The transfected cells were cultured for 7 d in the presence of appropriate concentrations of geneticin (G418), and the numbers of colonies and viable cells were counted by Giemsa staining in triplicate 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assays. The target sequences of the synthetic oligonucleotides for RNA interference were as follows: control 1 [enhanced green fluorescent protein gene (EGFP), a mutant of Aequorea victoria GFP], 5'-GAAGCAGCACGACTTCTTC-3'; control 2 (Scramble, chloroplast Euglena gracilis gene coding for 5S and 16S rRNAs), 5'-GCGCGCTTTGTAGGATTCG-3'; siRNA-DLX5-#1, 5'-CCAGCCAGAGAAAGAAGTG-3'; and siRNA-DLX5-#2, 5'-GTGCAGCCAGCTCAATCAA-3'. To validate our RNA interference system, down-regulation of DLX5 expression by functional siRNA, but not by controls or noneffective siRNA, was confirmed in the cell lines used for this assay.
| Results |
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2 = 237; P < 0.0001), we applied combined score for n-DLX5 and c-DLX5 for further clinicopathologic evaluation of DLX5; DLX5 was strongly stained in 160 cases (43.4%; score 2+) in nucleus and/or cytoplasm, weakly stained in 145 cases (39.3%; score 1+), and not stained in 64 cases (17.3%; score 0) in either nucleus or cytoplasm (Supplementary Table S1). We next examined a correlation of DLX5 expression (strong positive versus weak positive/absent in nucleus and/or cytoplasm) with various clinicopathologic variables and found its significant correlation with pT classification (higher in larger tumor; P = 0.0053 by Fisher's exact test; Table 1
). NSCLC patients whose tumors showed strong DLX5 expression (score 2+) in nucleus and/or cytoplasm revealed shorter tumor-specific survival periods compared with those with absent/weak DLX5 expression (P = 0.0045 by the Log-rank test; Fig. 2D; Supplementary Fig. S2). To evaluate the importance of strong n-DLX5 and/or c-DLX5 expression, we further divided the 160 cases with DLX5-strong positive into three groups; 125 revealed strong DLX5 staining in both nucleus and the cytoplasm (group 1, n-DLX5++ and c-DLX5++), 23 revealed its strong staining in the nucleus with weak/no staining in the cytoplasm (group 2, n-DLX5++ and c-DLX5+/–), and 12 revealed its strong staining in the cytoplasm with weak/no staining in the nucleus (group3, n-DLX5+/– and c-DLX5++). Tumors with high levels of DLX5 staining (score 2+) in nucleus and/or cytoplasm (median survival days for the groups 1, 2, and 3, 1,626, 1,546, and 1,665, respectively) were likely to have worse tumor-specific survival compared with those without any strong DLX5 staining (n-DLX5+/– and c-DLX5+/–; 2,496 days; Supplementary Fig. S2). The difference in tumor-specific survival among the three groups of NSCLCs with strong DLX5 staining was not significant, as indicated by Kaplan-Meier analysis and Log-rank test (Supplementary Fig. S2). We also applied univariate analysis to evaluate associations between patient prognosis and other factors including age (<65 years versus
65 years), gender (female versus male), histologic type (adenocarcinoma versus non-adenocarcinoma), pT classification (T1 versus T2, T3, and T4), pN classification (N0 versus N1 and N2), and DLX5 status (0 and 1+ versus 2+ in nucleus and/or cytoplasm). Among those variables, strong DLX5 staining (2+ in nucleus and/or cytoplasm; P = 0.0048), elderly (P = 0.0028), male (P = 0.001), non-adenocarcinoma histologic classification (P = 0.01), advanced pT stage (P < 0.0001), and advanced pN stage (P < 0.0001) were significantly associated with poor prognosis (Table 2
). In multivariate analysis of the prognostic factors, strong DLX5 expression (2+ in nucleus and/or cytoplasm), elderly, higher pT stage, and higher pN stage were indicated to be independent prognostic factors (P = 0.0415, 0.0007, 0.0004, and <0.0001, respectively; Table 2).
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| Discussion |
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The vertebrate Dlx genes, which encode a family of homeobox-containing transcription factors related in sequence to the Drosophila Distal-less (Dll) gene product, constitute one example of functional diversification of paralogs. All vertebrates investigated thus far have at least six Dlx genes that are generally arranged as three bigene clusters: Dlx1/Dlx2, Dlx5/Dlx6, and Dlx3/Dlx4 (Dlx7; refs. 30, 37–39). The Dlx5 protein is first expressed in the anterior region of mouse embryos during early embryonic development (37). It has been reported that homozygous Dlx5/Dlx6 double-knockout mice exhibit split hand/foot malformation phenotypes, a heterogeneous limb disorder characterized by missing central digits and claw-like distal extremities, suggesting that DLX5 gene is one of critical regulators for mammalian limb development (40). In fact, DLX5 was indicated to be a master regulatory transcriptional factor essential for initiating the cascade involved in osteoblast differentiation in mammals (41, 42).
In the present study, we showed that DLX5 gene was frequently overexpressed in lung cancer and might play an important role in the development/progression of lung cancers. In this study, knockdown of DLX5 expression by siRNA in lung cancer cells resulted in suppression of cell growth. Moreover, clinicopathologic evidence obtained through our tissue microarray experiments indicated that NSCLC patients with DLX5-strong positive tumors had shorter cancer-specific survival periods than those with DLX5-weak positive/negative tumors. The results obtained by in vitro and in vivo assays strongly suggested that DLX5 is likely to be an important growth factor and be associated with a more malignant phenotype of lung cancer cells. Because the DLX5 protein is present mainly in the nucleus and includes a homeodomain, it should play an important role in the transcriptional regulation and directly or indirectly transactivate various downstream genes in lung cancer cells. Interestingly, we also found 12 NSCLC cases with strong DLX5 staining in the cytoplasm of tumors but with weak/no staining in the nucleus (group3, n-DLX5+/–, and c-DLX5++), and their shorter tumor-specific survival (Supplementary Fig. S2). Some homeobox transcriptional factors are localized not only in the nucleus but also more predominantly in the cytoplasm (43, 44). HOXA7, a member of homeobox genes, changes its subcellular localization from the nucleus to the cytoplasm according to follicle maturation during ovarian folliculogenesis (43). Cell type- and stage-specific HOXA7 localization is likely to regulate granulosa cell proliferation, and granulosa cell tumors also express cytoplasmic HOXA7 (43). Other homeodomain-containing transcription factors, pre–B-Cell leukemia transcription factor families, are reported to be localized in the cytoplasm of the developing vertebrate embryo cells (44). Cytoplasmic localization of pre–B-Cell leukemia transcription factor is due to the modulation of nuclear localization signals, nuclear export sequences, and interaction with a cytoplasmic anchoring factor of nonmuscle myosin heavy chain II, whereas cytoplasmic distribution of pre–B-Cell leukemia transcription factor/knotted 1 homeobox 2 (PKNOX2 alias PREP2) is due to the concerted action of nuclear export and cytoplasmic retention by the actin and microtubule cytoskeletons (44). The precise molecular mechanism of DLX5 transport between the nucleus and cytoplasm, and whether c-DLX5 has an additional cytoplasm-specific function are not clear, but our data raise a possibility that c-DLX5 as well as n-DLX5 could contribute to the highly malignant phenotype of lung cancer cells by activating some unidentified signaling pathway(s). Further investigations of new pathway(s) involving c- and n-DLX5 could lead to a better understanding of the mechanisms of oncogene activation in pulmonary carcinogenesis. Because DLX5 is not expressed in any of normal adult tissues except the placenta, selective inhibition of DLX5 activity could be a promising therapeutic strategy that is expected to have a powerful biological activity against cancer with a minimal risk of adverse events.
In summary, DLX5 gene might play an important role in the growth/progression of lung cancers. DLX5 overexpression in resected specimens may be a useful index for application of adjuvant therapy to the patients who are likely to have poor prognosis. In addition, the data strongly imply the possibility of designing new anticancer drugs and cancer vaccines to specifically target the DLX5 for human cancer treatment.
| Footnotes |
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Note: Supplementary data for this article are available at Clinical Cancer Research Online (http://clincancerres.aacrjournals.org/).
Received 6/22/07; revised 12/13/07; accepted 1/18/08.
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in serum as predictors of poor response to gefitinib among patients with advanced non-small cell lung cancers. Cancer Res 2005;65:9176–84.This article has been cited by other articles:
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D. Hirata, T. Yamabuki, D. Miki, T. Ito, E. Tsuchiya, M. Fujita, M. Hosokawa, K. Chayama, Y. Nakamura, and Y. Daigo Involvement of Epithelial Cell Transforming Sequence-2 Oncoantigen in Lung and Esophageal Cancer Progression Clin. Cancer Res., January 1, 2009; 15(1): 256 - 266. [Abstract] [Full Text] [PDF] |
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