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Molecular Oncology, Markers, Clinical Correlates |
Laboratory of Cancer Genetics, Institute of Medical Technology, University of Tampere and Tampere University Hospital, FIN-33014 University of Tampere [E. H. S., T. I., N. M., A. R., J. S.]; Research Unit, Tampere University Hospital, FIN 33521 Tampere [V. A.]; and Department of Urology, Tampere University Hospital and Medical School, University of Tampere, FIN-33521 Tampere [M. P. M., T. L. J. T.], Finland
| ABSTRACT |
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Experimental Design: The youngest affected patient from each of 120 HPC families was initially used for the screening of MSR1 mutations by single-strand conformational polymorphism analysis. Selected variants of MSR1 gene were then screened in 537 unselected PRCA cases and in 480 controls.
Results: Among 120 HPC families, five MSR1 sequence variants were identified. The carrier frequencies of the R293X, P275A, and -14743A>G variants were compared between the probands with HPC, unselected PRCA cases, and healthy male blood donors. No significant differences were observed. The odds ratios for R293X, P275A, and -14743A>G mutations were also calculated to estimate the PRCA risk. No significantly elevated or lowered risks for PRCA among these three variants were detected. However, the mean age at diagnosis of the R293X mutation carriers among HPC probands was significantly lower compared with noncarriers (55.4 versus 65.4 years; t test, P = 0.04). The same trend was observed among unselected PRCA cases (65.7 versus 68.7 years; t test, P = 0.37).
Conclusions: Our results do not support a major role for the MSR1 gene in the causation of hereditary or unselected PRCAs but suggest a possible modifying role in cancer predisposition.
| INTRODUCTION |
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-helical coiled-coil, collagen-like, and isoform-specific COOH-terminal domain (15)
. SR-A types I and II are functional integral membrane glycoproteins that bind diverse array of macromolecules (16
, 17)
. Type III protein also contains six domains, but it is a nonfunctional protein acting as a dominant-negative isoform by blocking modified low-density lipoprotein uptake (14)
. Putative biological roles of SR-As include macrophage-host cell interactions, macrophage adhesion to substratum, endocytosis of ligands, phagocytosis of apoptotic cells and microbes, and clearance and detoxification of microbial products (17)
. Here, we report a study from Finland to additionally evaluate the association between PRCA and MSR1 gene. | MATERIALS AND METHODS |
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60 years of age. The mean age at diagnosis for the index patients was 62.2 years (range, 4481 years), and the mean number of affected family members was 3.2 (range, 26). The second cohort of families had only two affected members with ages at diagnosis >60 years. The mean age at diagnosis for the index patients in this cohort was 69.0 years (range, 6186). In both family cohorts the affected persons were first- or second-degree relatives. The youngest affected patient from each of 120 HPC families was initially used for the screening of MSR1 mutations by SSCP analysis. Selected variants of MSR1 gene were assayed in all of the other available affected and unaffected members of the mutation-positive families.
Patients with PRCA and Controls.
There were 634 consecutive patients diagnosed with PRCA in the Pirkanmaa Hospital District with a population of
450 000 during 19992000. We had samples from 85% of these patients, which results in an unselected, population-based collection of patients. The mean age at diagnosis for the patients with unselected PRCA was 68.6 years (range, 4790). Of the patients with unselected PRCA, 12% (66 of 537) reported a positive family history of PRCA. The controls consisted of DNA samples from anonymous male blood donors obtained from the Blood Center of the Finnish Red Cross in Tampere.
Written informed consent was obtained from all of the living patients and also, for families with HPC, from the unaffected members. The research protocols were approved by the Ethical Committee of the Tampere University Hospital (93175, 95062, and 99228), and the National Human Genome Research Institute (HG-0158). Permission for collection of families, in the entirety of Finland, was granted by the Ministry of Social Affairs and Health (59/08/95).
Mutation Screening with SSCP Analysis.
SSCP analysis of the entire coding sequence of the MSR1 gene was performed using primer sequences that were designed to include all of the intron-exon boundaries (GenBank accession nos. NM_138715, NM_002445, and NM_1387163
). On request, all of the primers are available from the authors. The 15-µl reaction mixture contained 1.5 mM MgCl2; 20 µM each of dATP, dCTP, dGTP, and dTTP; 0.5 µCi of
[33P]-dCTP (Amersham Pharmacia, Uppsala, Sweden); 0.6 µM of each primer; 1.0 unit AmpliTaqGold; the reaction buffer provided by the supplier (PE Biosystems, Foster City, CA); and 25 ng of the genomic DNA. For exon 10 the PCR reaction mixture contained 5% DMSO. Annealing temperature of 55°C was used for exons 14, 9, and 11; temperature of 51°C was used for exons 58, and exon 10 needed temperature of 53°C. Radiolabeled PCR products were mixed with 95% formamide dye, denatured at 95°C for 5 min, and chilled on ice. The 33P-labeled PCR products were electrophoresed at 800 V for 12 h at room temperature, in 0.5x mutation-detection-enhancement gel (FMC BioProducts, Rockland, ME) with 1% glycerol in 0.5x Tris-borate EDTA. After electrophoresis, gels were dried and exposed to Kodak BioMax maximum resolution films for 6 h. All of the samples in which variant bands were detected, as well as two to three normal bands per exon, were analyzed by sequencing using an automated ABI Prism 310 Genetic Analyzer (PE Biosystems, Foster City, CA). Variants were identified using Sequencher software version 3.0 (Gene Codes Corporation, Ann Arbor, MI).
Minisequencing and SSCP for Large-Scale Population Screening of Identified Variants.
The frequencies of P275A and R293X variants were determined in the entire set of 1137 samples by SSCP analysis as described above. R26H mutation was screened in 239 patients with unselected PRCA and in 240 controls by minisequencing (19)
. PCR for minisequencing was performed with 100 ng of DNA, 0.2 µM each primer, 0.2 mM each dNTP, 1.5 mM MgCl2, and 1.0 unit of AmpliTaqGold (PE Biosystems), in a final volume of 50 µl. The single nucleotide polymorphism in the promoter region was screened in 239 patients with unselected PRCA and in 192 controls by SSCP as described above.
Statistical Analyses.
Association of the MSR1 genotypes with HPC and unselected PRCA was tested by logistic-regression analysis, by use of the SPSS statistical software package (SPSS 11.0). Association with demographic, clinical, and pathological features of the disease was tested by the Mann-Whitney test, Pearson
2 test, and Fishers exact test by use of the SPSS statistical software package (SPSS 11.0).
| RESULTS AND DISCUSSION |
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2 test, P = 0.30). R293X and P275A were both found in three probands from different families. One family having 3 affected members carried both mutations but in different individuals. In this family, there was 1 affected (the proband) and 2 unaffected R293X carriers, and 1 unaffected P275A carrier. The second affected did not carry either of the variants, and the third affected could not be genotyped. The 2 other R293X mutation-positive families had only 2 affecteds; in both families they both carried the mutation. Two of the P275A-positive families had 2 affected relatives, and 1 had 3 affected relatives. P275A did not segregate with the disease in these families.
Carrier frequencies of the R293X and P275A variants were compared between patients and control subjects. The carrier frequencies for R293X were 2.5%, 1.1%, and 1.0%, in the 120 probands with HPC, 537 unselected PRCA cases, and 480 healthy blood donors, respectively. There was no statistically significant difference in the carrier frequencies between the different sample groups (Pearson
2 test, P = 0.41), although the percentage was highest among HPC patients. The carrier frequencies for P275A were 2.5%, 3.9%, and 4.2% in the probands with HPC, unselected PRCA cases, and healthy blood donors, respectively. No significant difference was observed in the carrier frequencies between the different sample groups (Pearson
2 test, P = 0.70). We also calculated the odds ratios for R293X, P275A, and -14743A>G mutations to estimate the PRCA risk (Table 2
.). There were no significant elevated or lowered risks for PRCA among these three variants.
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The carrier frequencies for P275A in the United States studies were 15.8% (30 of 190), 9.6% (29 of 301), and 16.4% (41 of 250) in the HPC families, non-HPC patients, and unaffected controls, respectively (10 , 11) . These frequencies were much higher compared with our results. This suggests that P275A is a more common variant in the heterogeneous United States population compared with the Finnish population, which is known to be historically isolated and genetically homogeneous (22) . P275A did not show cosegregation in the United States families either.
Our study is the first reported follow-up study to investigate the role of MSR1 in PRCA causation. The initial reports by Xu et al. (10 , 11) found that germ-line mutations and sequence variants of the MSR1 gene are associated with PRCA risk. Our results do not support a major role for the MSR1 gene in the causation of hereditary or unselected PRCAs. However, R293X mutation might influence disease onset by lowering the age at diagnosis. Consistent with the results, our recent genome wide linkage study in Finnish HPC families found no evidence for linkage on chromosome 8p (23) . Therefore, it is not surprising that we did not detect any significant association between MSR1 and PRCA. The present results warrant additional studies of the role that MSR1 variants have as risk factors for HPC and unselected PRCA in other populations.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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Supported by the Medical Research Found of Tampere University Hospital, the Finnish Cancer Organizations, and the Academy of Finland. E. H. S. received support from Pirkanmaa Cancer Society and from the University of Tampere.
1 To whom requests for reprints should be addressed, at Laboratory of Cancer Genetics, Institute of Medical Technology, Lenkkeilijänkatu 8, FIN-33014, University of Tampere, Tampere, Finland. Phone: 358-3-3117-4059; Fax: 358-3-3117-4168; E-mail: eija.seppala{at}uta.fi ![]()
2 The abbreviations used are: PRCA, prostate cancer; HPC, hereditary prostate cancer; SSCP, single-strand conformation polymorphism; SR-A, class A macrophage scavenger receptor. ![]()
3 Internet address, GenBank: http://www.ncbi.nlm.nih.gov/Genbank/index.html. ![]()
Received 5/ 5/03; revised 7/ 7/03; accepted 7/ 8/03.
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