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Precision Medicine and Imaging

Integrative Analysis of Pleomorphic Dermal Sarcomas Reveals Fibroblastic Differentiation and Susceptibility to Immunotherapy

Sebastian Klein, Alexander Quaas, Ka-Won Noh, Maria Cartolano, Nima Abedpour, Cornelia Mauch, Jennifer Quantius, Hans Christian Reinhardt, Reinhard Buettner, Martin Peifer and Doris Helbig
Sebastian Klein
1Institute for Pathology, University Hospital Cologne, Cologne, Germany.
2Else Kröner Forschungskolleg Clonal Evolution in Cancer, University Hospital Cologne, Cologne, Germany.
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  • For correspondence: mpeifer@uni-koeln.de sebastian.klein@uk-koeln.de doris.helbig@uk-koeln.de
Alexander Quaas
1Institute for Pathology, University Hospital Cologne, Cologne, Germany.
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Ka-Won Noh
1Institute for Pathology, University Hospital Cologne, Cologne, Germany.
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Maria Cartolano
3Department of Translational Genomics, Center of Integrated Oncology Cologne-Bonn, Medical Faculty, University of Cologne, Cologne, Germany.
4Center for Molecular Medicine, Medical Faculty, University Hospital Cologne, Cologne, Germany.
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Nima Abedpour
3Department of Translational Genomics, Center of Integrated Oncology Cologne-Bonn, Medical Faculty, University of Cologne, Cologne, Germany.
4Center for Molecular Medicine, Medical Faculty, University Hospital Cologne, Cologne, Germany.
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Cornelia Mauch
5Department of Dermatology, University Hospital Cologne, Cologne, Germany.
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Jennifer Quantius
1Institute for Pathology, University Hospital Cologne, Cologne, Germany.
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Hans Christian Reinhardt
6Clinic for Hematology, West German Cancer Center, University Hospital Essen, Essen, German Cancer Consortium (DKTK), Germany.
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  • ORCID record for Hans Christian Reinhardt
Reinhard Buettner
1Institute for Pathology, University Hospital Cologne, Cologne, Germany.
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Martin Peifer
3Department of Translational Genomics, Center of Integrated Oncology Cologne-Bonn, Medical Faculty, University of Cologne, Cologne, Germany.
4Center for Molecular Medicine, Medical Faculty, University Hospital Cologne, Cologne, Germany.
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  • For correspondence: mpeifer@uni-koeln.de sebastian.klein@uk-koeln.de doris.helbig@uk-koeln.de
Doris Helbig
5Department of Dermatology, University Hospital Cologne, Cologne, Germany.
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  • ORCID record for Doris Helbig
  • For correspondence: mpeifer@uni-koeln.de sebastian.klein@uk-koeln.de doris.helbig@uk-koeln.de
DOI: 10.1158/1078-0432.CCR-20-1899 Published November 2020
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Abstract

Purpose: Pleomorphic dermal sarcoma (PDS) is a rare malignant cutaneous tumor with an unknown cell of origin. Locally defined tumors can be treated by curative excisions, whereas advanced stages of the disease are difficult to treat, using standard regimens.

Experimental Design: We performed whole-exome sequencing on a cohort of 28 individuals and corresponding transcriptomic analysis on 21 patients, as well as quantitative IHC image analysis on 27 patients.

Results: PDS exhibits a universally high mutational load (42.7 mutations/mega base) with an inflamed, immunogenic tumor microenvironment. Three cases of PDS showed response to immune checkpoint blockade. Local mutation rate variation together with mRNA expression data demonstrate that PDS form a distinct entity, with PDGFRB as a lineage marker. In addition, we found that PDS is of mesenchymal, fibroblastic differentiation.

Conclusions: PDS is of fibroblastic differentiation and exhibits a strong susceptibility to immunotherapy, including a high mutational burden and an inflamed tumor microenvironment.

This article is featured in Highlights of This Issue, p. 5541

Footnotes

  • Note: Supplementary data for this article are available at Clinical Cancer Research Online (http://clincancerres.aacrjournals.org/).

  • Clin Cancer Res 2020;26:5638–45

  • Received May 18, 2020.
  • Revision received July 8, 2020.
  • Accepted August 7, 2020.
  • Published first August 17, 2020.
  • ©2020 American Association for Cancer Research.
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Clinical Cancer Research: 26 (21)
November 2020
Volume 26, Issue 21
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Integrative Analysis of Pleomorphic Dermal Sarcomas Reveals Fibroblastic Differentiation and Susceptibility to Immunotherapy
Sebastian Klein, Alexander Quaas, Ka-Won Noh, Maria Cartolano, Nima Abedpour, Cornelia Mauch, Jennifer Quantius, Hans Christian Reinhardt, Reinhard Buettner, Martin Peifer and Doris Helbig
Clin Cancer Res November 1 2020 (26) (21) 5638-5645; DOI: 10.1158/1078-0432.CCR-20-1899

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Integrative Analysis of Pleomorphic Dermal Sarcomas Reveals Fibroblastic Differentiation and Susceptibility to Immunotherapy
Sebastian Klein, Alexander Quaas, Ka-Won Noh, Maria Cartolano, Nima Abedpour, Cornelia Mauch, Jennifer Quantius, Hans Christian Reinhardt, Reinhard Buettner, Martin Peifer and Doris Helbig
Clin Cancer Res November 1 2020 (26) (21) 5638-5645; DOI: 10.1158/1078-0432.CCR-20-1899
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