CV-based performance robustness of the SVM classifier on training and test set in TCGA cohort
Dataset | 10-fold CV | C-index | Brier score | Log-rank P (geo. mean) |
---|---|---|---|---|
Training | 3-omics training (60%) | 0.70 (±0.04) | 0.19 (±0.01) | 0.001 |
Test | 3-omics test (40%) | 0.69 (±0.08) | 0.20 (±0.02) | 0.005 |
RNA only | 0.68 (±0.07) | 0.20 (±0.02) | 0.01 | |
miRNA only | 0.69 (±0.07) | 0.20 (±0.02) | 0.003 | |
Methylation only | 0.66 (±0.07) | 0.20 (±0.02) | 0.031 |
Abbreviation: geo., geometric.