Table 3.

List of genes on chromosome 3q with high expression levels in HPV+ tumors

HUGO IDDescription
Significance Analysis of Microarrays rank
3q band
Statistically significant expression difference with FDR <0.3%
FLJ39749Hypothetical protein629
MYNNMyoneurin zinc finger protein926.2
RFC4Replication factor C41627.3
MGC15397Hypothetical protein2128
TFDP2Transcription factor Dp-2 (E2F dimerization partner 2)3023
MGC64882Hypothetical protein3229
NDUFB5NADH dehydrogenase 1 β subcomplex, 53326.3
OPA1Optic atrophy 13828-29
RAP2BRas-related GTPase4725.2
FLJ35794Hypothetical protein4929
HES1Hairy and enhancer of split 15029
FLJ10560Hypothetical protein5428
SMARCA3Actin-dependent regulator of chromatin6025.1
EIF2B5Subunit 5ε for eukaryotic translation initiation factor 2B6127.1
ACTL6Actin-like protein 6A6526.3
PDCD10Programmed cell death 106726.2
POLR2HPolymerase (RNA) II (DNA directed) polypeptide H7728

Statistically significant expression difference with FDR <1%

ECT2Epithelial cell transforming sequence 2 oncogene9626.3
PPP1R2Protein phosphatase 1, regulatory (inhibitor) subunit 210829
MCCC1Methylcrotonoyl-CoA carboxylase 1 (α)11027
SHOX2Short stature homeobox 211325.3
MBNL1Muscle blind-like11425
SFRS10Splicing factor, arginine/serine-rich 1011626.2-27
DVL3Dishevelled, dsh homologue 314627
ABCC5ATP-binding cassette, subfamily C, member 517527.1
MAP3K13Mitogen-activated protein kinase kinase kinase 1317627
BDH3-Hydroxybutyrate dehydrogenase17929
DRE1DRE1 protein19027.3
EIF4G1Eukaryotic translation initiation factor 4 γ, 120627-ter
PIK3CAPhosphoinositide-3-kinase, catalytic, α polypeptide21126.3
NCBP2Nuclear cap binding protein subunit 222529
GMPSGuanine monophosphate synthetase23124
RP42RP42 homologue23926.3
LOC442100Hypothetical protein DKFZp434A12824427.2