Table 1.

Transcripts differentially expressed in PTC library compared with FTC, FTA, and normal libraries

SAGE tagsNormal libraries*PTC*FTC*FTA*Gene symbolTranscript descriptionGenBank accession no.
GTGGAGGGCA1025000CST6Cystatin E/MNM_001323
CAGGTTTCAT18900CXCL14Chemokine (C-X-C motif) ligand 14NM_004887
ACGAGGGGTG02000BCANBrevicanNM_198427
AATAGAAATT01901SPP1Secreted phosphoprotein 1 (osteopontin)NM_000582
CTTCTGCTGG63008DHRS3Dehydrogenase/reductase (SDR family) member 3NM_004753
ATATAATCTG54308LGALS3Lectin, galactoside-binding, soluble, 3 (galectin 3)NM_194327
ACTTTGTCCC01900GFAPGlial fibrillary acidic proteinNM_002055
CCTGCCCCGC14800SLC34A2Solute carrier family 34 (sodium phosphate), member 2NM_006424
AGAGAAGAAT03600NMUNeuromedin UNM_006681
TGACTGTGCT52900NRGNNeurogranin (protein kinase C) substrate, RC3)NM_006176
  • * SAGE tags counts refer to the number of SAGE tags in the libraries after normalization to 200,000 total tags.

  • Transcript description refers to the gene name to which tag was attributed according to the HUGO/GDB nomenclature committee approved symbols.

  • Transcripts selected for validation by qPCR.