Table 3.

Association of 15 SNPs with serum PSA levels in cases (preoperative) and controls

VariableChrPosition*Alleles
Cases
Controls
log in caseslog in controls
WRWWWRRRPWWWRRRP
rs26607533p1287,193,364CT8.808.6613.090.351.091.171.780.552.1752.1592.5720.0840.1560.5748.8021858.66247013.09198
rs93645546q25160,804,075CT8.708.6211.150.181.141.081.190.642.1632.1542.4110.1350.0760.1778.6971908.61926611.14510
rs104865677p1527,749,803TC10.048.788.840.771.151.071.140.722.3072.1732.1790.1360.0720.13110.044248.7845988.837464
rs64656577q2197,654,263TC8.378.889.300.611.131.081.170.662.1252.1842.2300.1250.0800.1558.3728978.8817629.299866
rs169019798q24 (2)128,194,098CA8.868.4916.010.401.101.162.770.202.1812.1392.7730.0950.1501.0208.8551568.49094216.00658
rs69832678q24 (3)128,482,487TG8.758.789.030.951.041.121.160.572.1692.1732.2000.0440.1090.1498.7495308.7845989.025013
rs14472958q24 (1)128,554,220CA8.779.437.290.521.101.140.550.272.1712.2441.9870.0990.127−0.5928.7670469.4309797.293620
rs15718019q33121,506,927GT8.889.097.680.521.061.131.420.102.1842.2072.0380.0610.1260.3518.8817629.0884107.675243
rs1099399410q1151,219,502CT9.808.568.470.231.091.071.290.122.2822.1472.1370.0890.0630.2589.7962538.5591428.473977
rs496241610q26126,686,862AG9.298.318.950.351.111.101.100.992.2292.1182.1920.1030.0980.0979.2905708.3144918.953101
rs1089644911q1368,751,243AG10.158.498.730.191.051.171.070.342.3172.1392.1670.0500.1610.07110.145198.4909428.732048
rs443079617q1233,172,153CT8.759.238.400.501.111.061.200.342.1692.2232.1280.1070.0560.1798.7495309.2349948.398053
rs185996217q24.366,620,348TG9.238.738.860.831.211.081.030.192.2232.1672.1820.1930.0770.0299.2349948.7320488.864016
rs273583919q1356,056,435AG9.098.348.990.690.790.861.232.9E-032.2072.1212.196−0.232−0.1550.2069.0884108.3394728.988985
rs5945619Xp1151,074,708AG8.768.940.931.101.001.120.822.1702.1900.0960.1138.75828418.935213
  • Abbreviations: W, wild-type; R, risk.

  • * Build35.

  • Wild-type and risk alleles are based on the previously published studies.