Table 1

A listing of the genes examined on the microarray chip

Genbank accession no.GeneChromosomeComplete names
NM_000927 ABCB1/MDR1 7q21ATP-binding cassette, sub-family B (MDR/TAP), member 1
NM_005157 ABL1 9q34Abelson murine leukmia viral oncogene homolog 1
NM_013229 APAF1 12q23Apoptotic protease activating factor, transcript variant 1 (mRNA)
NM_000038 APC 5q21Adenomatosis polyposis coli
NM_000044 AR Xq11Androgen receptor
NM_001188 BAK1 6p21.3BCL2-antagonist/killer 1
NM_004324 BAX 19q13.3BCL2-associated X protein, mRNA
NM_000633 BCL-2 18q21.3Oncogene B-cell leukemia 2
NM_001789 CDC25A 3p21Cell division cycle 25A
NM_004360 CDH1 16q22.1Cadherin 1, type 1, E-cadherin
NM_001793 CDH3 16q22.1Cadherin 3, type 1, P-cadherin
NM_000075 CDK4 12q14Cyclin-dependent kinase 4
NM_000389 CDKN1A 6p21.1Cyclin-dependent kinase inhibitor 1A (p21, Cip1)
NM_004064 CDKN1B 12p13Cyclin-dependent kinase inhibitor 1B (p27, Kip1)
NM_000076 CDKN1C 11p15.5KIP2 gene for Cdk-inhibitor p57KIP2
NM_000077 CDKN2A 9p21p16 (ink4a) cyclin-dependent kinase inhibitor 2A
NM_004936 CDKN2B 9p21p15 ink4b, cyclin-dependent kinase inhibitor 2B
NM_001320 CSNK2B 6p21.3Casein kinase II β
NM_001965 EGR4 2p13Early growth response 4; zinc finger gene pAT133
NM_005229 ELK1 Xp11.2ELK1, member of ETS oncogene family
NM_000125 ESR1 6q25Estrogen receptor 1
NM_005252 FOS 14q24.3fos proto-oncogene (c-fos), complete cds
NM_000407GP1b β22q11.2Platelet membrance glycoprotein 1b β precursor gene
NM_002093GSK3β3q13.3Glycogen synthase kinase 3 β gene
NM_000852 GSTP1 11q13Glutathione S-transferase π
NM_006497 HIC-1 17p13.3Hypermethylated in cancer 1
NM_019102 HOXA5 7p15Homeo box A5, mRNA
NM_002412 MGMT 10q26O-6-methylguanine-DNA-methyltransferase
NM_000249 MLH1 3p21Human mutL homologue
NM_005372 MOS 8q11v-mos, Moloney murine sarcoma viral oncogene
NM_002467 MYC 8q24.12c-myc proto-oncogene gene
M19720 MYCL1 1p34.3v-myc avian myelocytomatosis viral-related oncogene homolog 1
NM_002478 MYOD1 11p15Myogenic determinant 1
NM_000314 PTEN 19q23.3Phosphatase and tensin homologue
NM_000321 RB1 20q11.2Retinoblastoma 1
NM_005611 RBL2 16q12.2Retinoblastoma-like 2 (p130)
NM_003242 TGFBR2 3p22Transforming growth factor, β receptor II (70–80kD)
NM_005427 TP73 17p13.1Tumor protein p73